RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
VPS50-204ENST00000438395 SPECC1L-ADORA2AF8WAN1 911 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 FAM189A1O60320 539 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 MOSPD3O75425 235 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 AP1G2O75843 785 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 GCNT3O95395 438 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 CYP11A1P05108 521 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 IDEP14735 1019 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 DDIT3P35638 169 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 STAT6P42226 847 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 MLLT6P55198 1093 aaPredicted RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 CYP4F8P98187 520 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 AMPD2Q01433 879 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 FCHO2Q0JRZ9 810 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 ALCAMQ13740 583 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 SIM2Q14190 667 aaPredicted RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 LPAL2Q16609 132 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 NFE2Q16621 373 aaPredicted RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 ITPRIPL2Q3MIP1 535 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 STXBP5Q5T5C0 1151 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 WSCD1Q658N2 575 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 HEATR6Q6AI08 1181 aaKnown RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 SV2BQ7L1I2 683 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 NT5DC4Q86YG4 428 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 TMC8Q8IU68 726 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 OR10T2Q8NGX3 314 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 TTC8Q8TAM2 541 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 BPIFB1Q8TDL5 484 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 CACTINQ8WUQ7 758 aaKnown RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 MRPS31Q92665 395 aaKnown RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 FAM213AQ9BRX8 229 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 ZCWPW1Q9H0M4 648 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 CRISPLD1Q9H336 500 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 TASP1Q9H6P5 420 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 OBP2AQ9NY56 170 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 RBAKQ9NYW8 714 aaPredicted RBP8.36□□□□□ -1.07
VPS50-204ENST00000438395 PCDHB5Q9Y5E4 795 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 MIA3Q5JRA6 1907 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 CITO14578 2027 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 DOCK6Q96HP0 2047 aa8.36□□□□□ -1.07
VPS50-204ENST00000438395 ANO9A1A5B4 782 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 MYBPHLA2RUH7 354 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 KPNA7A9QM74 516 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 TISP43B9A030 160 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 ANKRD63C9JTQ0 380 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 PIRO00625 290 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 FOXD2O60548 495 aaPredicted RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 LILRB5O75023 590 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 PRPF40AO75400 957 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 WFS1O76024 890 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 VNN2O95498 520 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 PRAMEF12O95522 483 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 ADRB2P07550 413 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 RETP07949 1114 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 KRT19P08727 400 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 TMEM191BP0C7N4 346 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 DDX6P26196 483 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS50-204ENST00000438395 PCSK1P29120 753 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 SOX9P48436 509 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 CDR1P51861 262 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 MYL7Q01449 175 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 SATB1Q01826 763 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 CEBPZQ03701 1054 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 GRSF1Q12849 480 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS50-204ENST00000438395 SLC39A4Q6P5W5 647 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 CCDC73Q6ZRK6 1079 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 GAREM2Q75VX8 874 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 ITPKCQ96DU7 683 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 EPSTI1Q96J88 318 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 ZFYVE19Q96K21 471 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 TMEM209Q96SK2 561 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 CCSER1Q9C0I3 900 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 ST6GALNAC4Q9H4F1 302 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 KIF9Q9HAQ2 790 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 RBM12Q9NTZ6 932 aaKnown RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 DLL3Q9NYJ7 618 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 TBC1D7Q9P0N9 293 aa8.35□□□□□ -1.07
VPS50-204ENST00000438395 UXTQ9UBK9 157 aaPredicted RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
VPS50-204ENST00000438395 COL4A3Q01955 1670 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 MED19A0JLT2 244 aaPredicted RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CHURC1-FNTBB4DL54 471 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ARNTLO00327 626 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CLSTN1O94985 981 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ZIC2O95409 532 aaPredicted RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 ITGB3P05106 788 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms