RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 KIAA1549LQ6ZVL6 1849 aa15.47■□□□□ 0.07
TNFRSF1A-203ENST00000437813 DPYSL4O14531 572 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 CUTAO60888 179 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 ATP2C2O75185 946 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 LMO2P25791 158 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 DDX6P26196 483 aaKnown RBP eCLIP15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 MAGEA11P43364 429 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 CXCL12P48061 93 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 LHX1P48742 406 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 KPNA1P52294 538 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 NRLP54845 237 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 PON2Q15165 354 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 ITPRIPL2Q3MIP1 535 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 DGKKQ5KSL6 1271 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 WDR49Q8IV35 697 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 MAB21L3Q8N8X9 362 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 TTC8Q8TAM2 541 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 SCFD1Q8WVM8 642 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 SLC22A12Q96S37 553 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 PARD6AQ9NPB6 346 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 CRTAC1Q9NQ79 661 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 AGPAT3Q9NRZ7 376 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 TDP1Q9NUW8 608 aa15.46■□□□□ 0.07
TNFRSF1A-203ENST00000437813 MYO16Q9Y6X6 1858 aa15.46■□□□□ 0.06
TNFRSF1A-203ENST00000437813 EML5Q05BV3 1969 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ATG2BQ96BY7 2078 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZNF233A6NK53 670 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 HRO43593 1189 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TMEM191BP0C7N4 346 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 RPL10AP62906 217 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 MYL7Q01449 175 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 LRRC32Q14392 662 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 BMT2Q1RMZ1 405 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TMEM196Q5HYL7 178 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 FAM26FQ5R3K3 315 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PKN3Q6P5Z2 889 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SYNPOQ8N3V7 929 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 DHX58Q96C10 678 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 HPDLQ96IR7 371 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 KIF9Q9HAQ2 790 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 GCNT4Q9P109 453 aa15.45■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TRDMT1O14717 391 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 KRT19P08727 400 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 WARSP23381 471 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PCSK1P29120 753 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CASP1P29466 404 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 USP4Q13107 963 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 RUNX3Q13761 415 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PKP1Q13835 747 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PUM1Q14671 1186 aaKnown RBP eCLIP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PSMD6Q15008 389 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SURF1Q15526 300 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZNF77Q15935 545 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 DUOXA2Q1HG44 320 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TRIM68Q6AZZ1 485 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 FSTL4Q6MZW2 842 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 UNC13DQ70J99 1090 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TRAPPC11Q7Z392 1133 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 C12orf56Q8IXR9 622 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZNF516Q92618 1163 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 EZH1Q92800 747 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 GCNAQ96QF7 691 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 LRRC27Q9C0I9 530 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 KIAA1586Q9HCI6 787 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 FBRSL1Q9HCM7 1045 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TMEM30AQ9NV96 361 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 NCDNQ9UBB6 729 aa15.44■□□□□ 0.06
TNFRSF1A-203ENST00000437813 UBE4BO95155 1302 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SDK1Q7Z5N4 2213 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 MED19A0JLT2 244 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CHURC1-FNTBB4DL54 471 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ARSAP15289 507 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TCF3P15923 654 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 AVPR1AP37288 418 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 FNTBP49356 437 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ASIC1P78348 528 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 ZXDBP98169 803 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CYP24A1Q07973 514 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 TAF12Q16514 161 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 RESP18Q5W5W9 173 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 NAIF1Q69YI7 327 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 LAIR1Q6GTX8 287 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 STXBP4Q6ZWJ1 553 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 GPR161Q8N6U8 529 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 PLEKHO2Q8TD55 490 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 MRPS31Q92665 395 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 SPATA17Q96L03 361 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CEP295NLQ96MC4 621 aa15.43■□□□□ 0.06
TNFRSF1A-203ENST00000437813 CYP2S1Q96SQ9 504 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms