RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
SGCE-205ENST00000437425 STARD7Q9NQZ5 370 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 FAM114A2Q9NRY5 505 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 TRIP11Q15643 1979 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 A0A1W2PQ45 241 aaPredicted RBP16.21■□□□□ 0.19
SGCE-205ENST00000437425 A0A1W2PQY0 241 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 ARL5CA6NH57 179 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 BHMG1C9JSJ3 638 aaPredicted RBP16.21■□□□□ 0.19
SGCE-205ENST00000437425 GLI1P08151 1106 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 KRT7P08729 469 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 GHRP10912 638 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 CD52P31358 61 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 PTPN7P35236 360 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 LHX1P48742 406 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 BCAT1P54687 386 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 DRG2P55039 364 aaKnown RBP16.21■□□□□ 0.19
SGCE-205ENST00000437425 RPL7AP62424 266 aaKnown RBP16.21■□□□□ 0.19
SGCE-205ENST00000437425 DR1Q01658 176 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 CASP8Q14790 479 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 PHLDB2Q86SQ0 1253 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 ACOT1Q86TX2 421 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 ANKRD52Q8NB46 1076 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 KBTBD7Q8WVZ9 684 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 SEC14L1Q92503 715 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 PKNOX2Q96KN3 472 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 TRIM7Q9C029 511 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 LRRC19Q9H756 370 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 RSAD1Q9HA92 442 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
SGCE-205ENST00000437425 CYTH4Q9UIA0 394 aa16.21■□□□□ 0.19
SGCE-205ENST00000437425 ARVCFO00192 962 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 INPPL1O15357 1258 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 RNF8O76064 485 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 EOMESO95936 686 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 PSMA2P25787 234 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 MLH1P40692 756 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SSR1P43307 286 aaKnown RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 SOX4Q06945 474 aaPredicted RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 BST2Q10589 180 aaKnown RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 GRIK3Q13003 919 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 ORC1Q13415 861 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 PPP1R26Q5T8A7 1209 aaPredicted RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 CYP4A22Q5TCH4 519 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SYDE1Q6ZW31 735 aaPredicted RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 ARCQ7LC44 396 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 TMEM110Q86TL2 294 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 GRK7Q8WTQ7 553 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SLC35F5Q8WV83 523 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SLCO2A1Q92959 643 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
SGCE-205ENST00000437425 GAD1Q99259 594 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 FTHL17Q9BXU8 183 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 ASNSD1Q9NWL6 643 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 EFR3BQ9Y2G0 817 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 SCN1AP35498 2009 aa16.2■□□□□ 0.18
SGCE-205ENST00000437425 CYB561D2O14569 222 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 ZMYND10O75800 440 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 ERBB2P04626 1255 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 CKBP12277 381 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 ZNF618Q5T7W0 954 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 LLGL2Q6P1M3 1020 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 AGMOQ6ZNB7 445 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 PRELID2Q8N945 189 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 GSTCDQ8NEC7 633 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 HSFY1Q96LI6 401 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 ZFP42Q96MM3 310 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 ADAM2Q99965 735 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 ST7Q9NRC1 585 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 USTQ9Y2C2 406 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 DNM1LO00429 736 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 GABRDO14764 452 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 SPTLC1O15269 473 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 TJP3O95049 919 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 COL6A1P12109 1028 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 RFC1P35251 1148 aaPredicted RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 PCK1P35558 622 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 RPL34P49207 117 aaKnown RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 ZNF143P52747 638 aaPredicted RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 LMNB2Q03252 620 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 BFSP2Q13515 415 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 SMC1AQ14683 1233 aaKnown RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 CCDC50Q8IVM0 306 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 TMEM130Q8N3G9 435 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 C12orf29Q8N999 325 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 UBA3Q8TBC4 463 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 CNPY3Q9BT09 278 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 OSBPL8Q9BZF1 889 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
SGCE-205ENST00000437425 METTL5Q9NRN9 209 aaKnown RBP16.19■□□□□ 0.18
SGCE-205ENST00000437425 RGS18Q9NS28 235 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 DSEQ9UL01 958 aa16.19■□□□□ 0.18
SGCE-205ENST00000437425 PFKMP08237 780 aa16.18■□□□□ 0.18
SGCE-205ENST00000437425 COILP38432 576 aaPredicted RBP16.18■□□□□ 0.18
SGCE-205ENST00000437425 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms