RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 WHRNQ9P202 907 aa27.11■■□□□ 1.93
CPNE1-216ENST00000437340 TUBGCP4Q9UGJ1 667 aa27.11■■□□□ 1.93
CPNE1-216ENST00000437340 GOLGA8SH3BPF8 625 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 GAS8O95995 478 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 KCNE1P15382 129 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 GJC1P36383 396 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 ACAP1Q15027 740 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 UBXN11Q5T124 520 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 C9orf57Q5W0N0 161 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 UNC93AQ86WB7 457 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 IPO4Q8TEX9 1081 aaKnown RBP27.1■■□□□ 1.93
CPNE1-216ENST00000437340 UBLCP1Q8WVY7 318 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-216ENST00000437340 ART4Q93070 314 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 MTG1Q9BT17 334 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-216ENST00000437340 HEMGNQ9BXL5 484 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 TJP2Q9UDY2 1190 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 SNX9Q9Y5X1 595 aa27.1■■□□□ 1.93
CPNE1-216ENST00000437340 KRT1P04264 644 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 LMAN1P49257 510 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 KRT17Q04695 432 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 PTK6Q13882 451 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 RNF25Q96BH1 459 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 TSPAN16Q9UKR8 245 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 TJP3O95049 919 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 C6orf222P0C671 652 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 PRKAR2AP13861 404 aaKnown RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 TCF4P15884 667 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 CCND3P30281 292 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 KCTD19Q17RG1 926 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 JOSD2Q8TAC2 188 aa27.09■■□□□ 1.93
CPNE1-216ENST00000437340 C18orf25Q96B23 403 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-216ENST00000437340 MYADML2A6NDP7 307 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 GOLGA6L10A6NI86 522 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 PIRO00625 290 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 PPEF2O14830 753 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 SEPT4O43236 478 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 GNRH1P01148 92 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 KRT7P08729 469 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 CYP3A5P20815 502 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 AKAP5P24588 427 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 CALCOCO2Q13137 446 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 SNX1Q13596 522 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 HADHQ16836 314 aaKnown RBP27.08■■□□□ 1.93
CPNE1-216ENST00000437340 ATP13A4Q4VNC1 1196 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 ODF2Q5BJF6 829 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 RAET1EQ8TD07 263 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 ATG4AQ8WYN0 398 aa27.08■■□□□ 1.93
CPNE1-216ENST00000437340 R3HDM2Q9Y2K5 976 aaKnown RBP27.08■■□□□ 1.93
CPNE1-216ENST00000437340 SMIM28A0A1B0GU29 152 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 SETSIPP0DME0 302 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 PNPLA4P41247 253 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 CEP85LQ5SZL2 805 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 ZFYVE27Q5T4F4 411 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 DRICH1Q6PGQ1 229 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-216ENST00000437340 MFSD7Q6UXD7 560 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 SPOCD1Q6ZMY3 1216 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 ANKS1BQ7Z6G8 1248 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 ZNF560Q96MR9 790 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 MRPL45Q9BRJ2 306 aaKnown RBP27.07■■□□□ 1.92
CPNE1-216ENST00000437340 UPF3AQ9H1J1 476 aaKnown RBP27.07■■□□□ 1.92
CPNE1-216ENST00000437340 METTL5Q9NRN9 209 aaKnown RBP27.07■■□□□ 1.92
CPNE1-216ENST00000437340 EFR3BQ9Y2G0 817 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 ATP8A1Q9Y2Q0 1164 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 TRIP11Q15643 1979 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 ITIH2P19823 946 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 EIF3BP55884 814 aaKnown RBP27.07■■□□□ 1.92
CPNE1-216ENST00000437340 NKX3-2P78367 333 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 LMNB2Q03252 620 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 SLMAPQ14BN4 828 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 TFDP3Q5H9I0 405 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 GNASQ5JWF2 1037 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 GLRA4Q5JXX5 417 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 FBXO47Q5MNV8 452 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 SPC25Q9HBM1 224 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 TMBIM4Q9HC24 238 aa27.07■■□□□ 1.92
CPNE1-216ENST00000437340 HMGB1P1B2RPK0 211 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-216ENST00000437340 LRCH4O75427 683 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 SLC25A11Q02978 314 aaKnown RBP27.06■■□□□ 1.92
CPNE1-216ENST00000437340 UBA3Q8TBC4 463 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 ATP6V1G3Q96LB4 118 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 APOL6Q9BWW8 343 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 PABPC3Q9H361 631 aaKnown RBP27.06■■□□□ 1.92
CPNE1-216ENST00000437340 GDAP2Q9NXN4 497 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 GTF2IRD1Q9UHL9 959 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 IPPQ9Y573 584 aa27.06■■□□□ 1.92
CPNE1-216ENST00000437340 TRIP12Q14669 1992 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-216ENST00000437340 PI4K2BG5E9Z4 385 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 MYZAPP0CAP1 466 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 PMS2P54278 862 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 CAV1Q03135 178 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 ZNF844Q08AG5 666 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 GOLGA7BQ2TAP0 167 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 PKDCCQ504Y2 493 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 DPH6Q7L8W6 267 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 ASIC3Q9UHC3 531 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 NEU2Q9Y3R4 380 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 SCN1AP35498 2009 aa27.05■■□□□ 1.92
CPNE1-216ENST00000437340 hCG_1818297A0A087WSY0 165 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 M0QZ92 97 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 PFKMP08237 780 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms