RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 WHAMMQ8TF30 809 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 PNMA5Q96PV4 448 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 FLNCQ14315 2725 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 B8ZZF3 427 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 N4BP3O15049 544 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 AP5Z1O43299 807 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 GJB3O75712 270 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 EIF2S3P41091 472 aaKnown RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 SEC13P55735 322 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 CYP4F8P98187 520 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 GNL2Q13823 731 aaKnown RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 CRY1Q16526 586 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 C2orf27AQ580R0 203 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 RINT1Q6NUQ1 792 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 CC2D1AQ6P1N0 951 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 ZBTB8OSQ8IWT0 167 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
CPNE1-214ENST00000435747 GCNAQ96QF7 691 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.64e-7■■■□□ 18.8
CPNE1-214ENST00000435747 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 PCOLCE2Q9UKZ9 415 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 MMP17Q9ULZ9 603 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 KIF3AQ9Y496 699 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 DENND4CQ5VZ89 1909 aa11.3□□□□□ -0.6
CPNE1-214ENST00000435747 FAM149AA5PLN7 773 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 E9PAM4 449 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PODXLO00592 558 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 SLC28A2O43868 658 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 HLA-EP13747 358 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PROZP22891 400 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 GUCY2CP25092 1073 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 NPTX2P47972 431 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 EFNA5P52803 228 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 BFSP1Q12934 665 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PPP2R5AQ15172 486 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PDGFRLQ15198 375 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 XKR4Q5GH76 650 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
CPNE1-214ENST00000435747 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 DNAJB7Q7Z6W7 309 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-214ENST00000435747 CPA6Q8N4T0 437 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 KCTD17Q8N5Z5 321 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 KCNN1Q92952 543 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PSMG2Q969U7 264 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PGLYRP2Q96PD5 576 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 NTPCRQ9BSD7 190 aaKnown RBP11.29□□□□□ -0.6
CPNE1-214ENST00000435747 PI4K2AQ9BTU6 479 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 NUB1Q9Y5A7 615 aa11.29□□□□□ -0.6
CPNE1-214ENST00000435747 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 HIP1RO75146 1068 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 CDC25CP30307 473 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 AVPR1AP37288 418 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 CSRP3P50461 194 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
CPNE1-214ENST00000435747 DUSP4Q13115 394 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 MAP7D1Q3KQU3 841 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 ITIH5Q86UX2 942 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-214ENST00000435747 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 BEST2Q8NFU1 509 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 ECT2Q9H8V3 914 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-214ENST00000435747 DNM3Q9UQ16 869 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 CCL26Q9Y258 94 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 MYH11P35749 1972 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 PHLPP2Q6ZVD8 1323 aa11.28□□□□□ -0.6
CPNE1-214ENST00000435747 COL5A1P20908 1838 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-214ENST00000435747 CITO14578 2027 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms