RNA–Protein interactions for RNA: ENST00000435331.3

HCG2040054-201, humanhuman

TSL 3 BASIC

Gene HCG2040054, Length 434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG2040054-201ENST00000435331 PALB2Q86YC2 1186 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 ADGRF2Q8IZF7 708 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 FUKQ8N0W3 1084 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SLC39A11Q8N1S5 342 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 LRRC43Q8N309 656 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 C12orf29Q8N999 325 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 B3GALNT2Q8NCR0 500 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 MSANTD4Q8NCY6 345 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 C3orf20Q8ND61 904 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 ACRBPQ8NEB7 543 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 ZNF461Q8TAF7 563 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 HDAC7Q8WUI4 952 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SLC20A1Q8WUM9 679 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CTNNBL1Q8WYA6 563 aaPredicted RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PIK3R5Q8WYR1 880 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 IRGQQ8WZA9 623 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 BADQ92934 168 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CD101Q93033 1021 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SECISBP2LQ93073 1101 aaKnown RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 HES6Q96HZ4 224 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PBKQ96KB5 322 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 FAM84AQ96KN4 292 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SPATA17Q96L03 361 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 C8orf48Q96LL4 319 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SLC9A7Q96T83 725 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PAAF1Q9BRP4 392 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 C11orf84Q9BUA3 381 aaPredicted RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 APOL6Q9BWW8 343 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 B3GNT5Q9BYG0 378 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 GPR62Q9BZJ7 368 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PPP1R12CQ9BZL4 782 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 THAP2Q9H0W7 228 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 MTIF3Q9H2K0 278 aaKnown RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SMYD3Q9H7B4 428 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PRDM16Q9HAZ2 1276 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CNGB3Q9NQW8 809 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 MARCH5Q9NX47 278 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 DDX43Q9NXZ2 648 aaKnown RBP4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 TAS2R14Q9NYV8 317 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SPG21Q9NZD8 308 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 HESX1Q9UBX0 185 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 GUCA1BQ9UMX6 200 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 RWDD3Q9Y3V2 267 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CEP83Q9Y592 693 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 PCDHA3Q9Y5H8 950 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 SCINQ9Y6U3 715 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 MYH15Q9Y2K3 1946 aa4.3□□□□□ -1.72
HCG2040054-201ENST00000435331 CASP8AP2Q9UKL3 1982 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 SF3B1O75533 1304 aaKnown RBP eCLIP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CCDC66A2RUB6 948 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CTAGE9A4FU28 777 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CASTOR2A6NHX0 329 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 TBKBP1A7MCY6 615 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 HHLA1C9JL84 531 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 TNFRSF10BO14763 440 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 SART1O43290 800 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 B4GALT3O60512 393 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 SOD2P04179 222 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ITGB1P05556 798 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 TUBBP07437 444 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CFHP08603 1231 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 PNMA6AP0CW24 399 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 KRT3P12035 628 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ATF2P15336 505 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CD19P15391 556 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 NPR3P17342 541 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 TCP1P17987 556 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CD58P19256 250 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 RRM1P23921 792 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 CTNNA2P26232 953 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 RFC1P35251 1148 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 PPM1AP35813 382 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 BRCC3P46736 316 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 OR1G1P47890 313 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 PPP3CCP48454 512 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ZNF143P52747 638 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 BCAT1P54687 386 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 EPHB4P54760 987 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 YWHAZP63104 245 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 MRPS5P82675 430 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 AMPD2Q01433 879 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 SLC6A3Q01959 620 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 KRT17Q04695 432 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 PDE4CQ08493 712 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 BST2Q10589 180 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 MTA1Q13330 715 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 RPS6KA1Q15418 735 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 PPP2R5EQ16537 467 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ZNF394Q53GI3 561 aa4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 INTS6LQ5JSJ4 861 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 VARS2Q5ST30 1063 aaKnown RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 ACBD5Q5T8D3 534 aaPredicted RBP4.29□□□□□ -1.72
HCG2040054-201ENST00000435331 NAA35Q5VZE5 725 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms