RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PPP1R14CQ8TAE6 165 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ETNPPLQ8TBG4 499 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 TAGLN3Q9UI15 199 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 DNPEPQ9ULA0 475 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CASZ1Q86V15 1759 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ARHGAP10A1A4S6 786 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 RFX1P22670 979 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 TMED10P49755 219 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ATP1A4Q13733 1029 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 KRT72Q14CN4 511 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 STXBP4Q6ZWJ1 553 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CTAGE3PQ8IX95 158 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ZCCHC9Q8N567 271 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 IKBKGQ9Y6K9 419 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 I3L4J1 428 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 SH3BP5O60239 455 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 FDFT1P37268 417 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 GSTO1P78417 241 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 C6orf52Q5T4I8 152 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 PPP1R2P3Q6NXS1 205 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 RSPH3Q86UC2 560 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ANKRD2Q9GZV1 360 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 SIPA1L3O60292 1781 aaPredicted RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 HTR3EA5X5Y0 456 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ATP2A1O14983 1001 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 KRT5P13647 590 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 GSTM4Q03013 218 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ANO5Q75V66 913 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 RHPN2Q8IUC4 686 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 PALM2Q8IXS6 379 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CPNE9Q8IYJ1 553 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CCDC127Q96BQ5 260 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 FAM81BQ96LP2 452 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 TELO2Q9Y4R8 837 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ERVV-2B6SEH9 535 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 STRNO43815 780 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 KIF22Q14807 665 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 OASLQ15646 514 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CCDC80Q76M96 950 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 ZC3H3Q8IXZ2 948 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 DIS3LQ8TF46 1054 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 C17orf50Q8WW18 174 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 CPA5Q8WXQ8 436 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 PAIP1Q9H074 479 aaKnown RBP7.8□□□□□ -1.16
CPSF6-202ENST00000435070 RABGAP1Q9Y3P9 1069 aa7.8□□□□□ -1.16
CPSF6-202ENST00000435070 GOLGA8IPA6NC78 632 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GOLGA8JA6NMD2 632 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GSTT2P0CG29 244 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GSTT2BP0CG30 244 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 DYNLT1P63172 113 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 BST1Q10588 318 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 DNAL1Q4LDG9 190 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 ANKS1BQ7Z6G8 1248 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TPH2Q8IWU9 490 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF276Q8N554 614 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 APOL6Q9BWW8 343 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 A0A088AWK7 358 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SGK1O00141 431 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 POLR2MP0CAP2 368 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 CENPUQ71F23 418 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 NUP93Q8N1F7 819 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 RNF148Q8N7C7 305 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 BBOF1Q8ND07 529 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 PIGBQ92521 554 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 XPNPEP1Q9NQW7 623 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FAIMQ9NVQ4 179 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 RRN3Q9NYV6 651 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GTPBP10A4D1E9 387 aaKnown RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GRIN3AQ8TCU5 1115 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 MMP19Q99542 508 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 VPS11Q9H270 941 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 IFT122Q9HBG6 1241 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SAE1Q9UBE0 346 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GPX6P59796 221 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SNAP25P60880 206 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 PPP3CAQ08209 521 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 CCNIQ14094 377 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 HNRNPDQ14103 355 aaKnown RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 CHI3L2Q15782 390 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF362Q5T0B9 420 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 BTN2A1Q7KYR7 527 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 DEFB107AQ8IZN7 70 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SLC7A5P1Q8MH63 180 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 DCUN1D1Q96GG9 259 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SENP7Q9BQF6 1050 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TMEM121Q9BTD3 319 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 ZFYVE1Q9HBF4 777 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SOX13Q9UN79 622 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 PLA2G4CQ9UP65 541 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TRIM17Q9Y577 477 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms