RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 ZNF711Q9Y462 761 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 LCTP09848 1927 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 C2CD2LO14523 706 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PROSCO94903 275 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 CD1EP15812 388 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 MCCD1P59942 119 aaPredicted RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 CCNG2Q16589 344 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PRPF39Q86UA1 669 aaKnown RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 ARID3BQ8IVW6 561 aaPredicted RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 EZH1Q92800 747 aaPredicted RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 NMD3Q96D46 503 aaKnown RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 ZNF668Q96K58 619 aaPredicted RBP10.98□□□□□ -0.65
SCAF4-203ENST00000434667 FNBP1Q96RU3 617 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 EBF4Q9BQW3 602 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 TEKT3Q9BXF9 490 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 C20orf27Q9GZN8 174 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PCDHGB4Q9UN71 923 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PCDHB4Q9Y5E5 795 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 PCDHGB5Q9Y5G0 923 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
SCAF4-203ENST00000434667 CCDC22O60826 627 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 TMEM63AO94886 807 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 MUTP22033 750 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SLC25A3Q00325 362 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RASA2Q15283 850 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SLC45A4Q5BKX6 768 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PPP6R3Q5H9R7 873 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RIPOR1Q6ZS17 1223 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 DCAF4Q8WV16 495 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PIH1D1Q9NWS0 290 aaKnown RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 LRCH1Q9Y2L9 728 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 HNRNPDLO14979 420 aaKnown RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 MAGEB2O15479 319 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 MAP3K7O43318 606 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 LPXNO60711 386 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PGM3O95394 542 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 FOSP01100 380 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SKIP12755 728 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 YWHABP31946 246 aaKnown RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 ZNF252P-AS1Q0IIN9 211 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 CLUL1Q15846 466 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 OLFML2BQ68BL8 750 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 MOXD1Q6UVY6 613 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 NPNTQ6UXI9 565 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SDCCAG8Q86SQ7 713 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 EMC1Q8N766 993 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 AGR3Q8TD06 166 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SLCO2A1Q92959 643 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PANX3Q96QZ0 392 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 TRIM55Q9BYV6 548 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SYNCQ9H7C4 482 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 ETNK2Q9NVF9 386 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SLC17A6Q9P2U8 582 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PSMC3IPQ9P2W1 217 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 GOLGA4Q13439 2230 aaKnown RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 LYNP07948 512 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 MSX2P35548 267 aaPredicted RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 IGBP1P78318 339 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 HIF1AQ16665 826 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 CNPY1Q3B7I2 92 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 RALGPS1Q5JS13 557 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 SCARA5Q6ZMJ2 495 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PALM2Q8IXS6 379 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 FAM71DQ8N9W8 422 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 IFT43Q96FT9 208 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 GORASP1Q9BQQ3 440 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
SCAF4-203ENST00000434667 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 A0A0G2JMZ2 1700 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 LRRC37A2A6NM11 1700 aa10.97□□□□□ -0.65
SCAF4-203ENST00000434667 PRPF4O43172 522 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCAF4-203ENST00000434667 TCEA3O75764 348 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 NPTX2P47972 431 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 STAT2P52630 851 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 VPS72Q15906 364 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 GRAMD1BQ3KR37 738 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 TBC1D25Q3MII6 688 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 UNC45BQ8IWX7 931 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 NETO2Q8NC67 525 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 FBXO41Q8TF61 875 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 C8orf37Q96NL8 207 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 ATP2A1O14983 1001 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 CIB2O75838 187 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 ATP5HO75947 161 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 HOXA7P31268 230 aaPredicted RBP10.96□□□□□ -0.65
SCAF4-203ENST00000434667 GRIA2P42262 883 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 YWHAGP61981 247 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCAF4-203ENST00000434667 KBTBD12Q3ZCT8 623 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.65
SCAF4-203ENST00000434667 SPATA24Q86W54 205 aa10.96□□□□□ -0.65
SCAF4-203ENST00000434667 MOCOSQ96EN8 888 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms