RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
CD44-209ENST00000433892 CLUHO75153 1309 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 ABLIM1O14639 778 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 MAGEB2O15479 319 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 GJB1P08034 283 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 KRT19P08727 400 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 HOXC6P09630 235 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 KRT4P19013 534 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 CDH8P55286 799 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 TFDP1Q14186 410 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 POLNQ7Z5Q5 900 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 PYROXD1Q8WU10 500 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 SEPT1Q8WYJ6 367 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 CPT1BQ92523 772 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 MYLK2Q9H1R3 596 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 PSMC3IPQ9P2W1 217 aaPredicted RBP12.41□□□□□ -0.42
CD44-209ENST00000433892 PCSK1NQ9UHG2 260 aa12.41□□□□□ -0.42
CD44-209ENST00000433892 SMG5Q9UPR3 1016 aaKnown RBP12.41□□□□□ -0.42
CD44-209ENST00000433892 SOWAHBA6NEL2 793 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 SIGLEC16A6NMB1 481 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 B4GALT5O43286 388 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 TYROBPO43914 113 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 MSH2P43246 934 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 PSMC1P62191 440 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 PDK4Q16654 411 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 IER5Q5VY09 327 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 ZBTB8OSQ8IWT0 167 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 LRRC8CQ8TDW0 803 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 ERP27Q96DN0 273 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 CPXM1Q96SM3 734 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 SYNCQ9H7C4 482 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 ETNK1Q9HBU6 452 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 SENP1Q9P0U3 644 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 BTBD7Q9P203 1132 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 SLC24A2Q9UI40 661 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 RABGEF1Q9UJ41 708 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 STRIP2Q9ULQ0 834 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 TCRBV7S3A2A0A539 114 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 UNC5CO95185 931 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 FGFR1P11362 822 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 ALADP13716 330 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 CCNB1P14635 433 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 KDELR1P24390 212 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 POLR2BP30876 1174 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 RPL22P35268 128 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 YWHAEP62258 255 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 TAF5Q15542 800 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 CDCA2Q69YH5 1023 aaPredicted RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 C3orf62Q6ZUJ4 267 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 RSAD2Q8WXG1 361 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 GEMIN8Q9NWZ8 242 aaKnown RBP12.4□□□□□ -0.42
CD44-209ENST00000433892 CHKBQ9Y259 395 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
CD44-209ENST00000433892 EDF1O60869 148 aaKnown RBP12.39□□□□□ -0.43
CD44-209ENST00000433892 TNNC2P02585 160 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 KRT7P08729 469 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 SLC18A1P54219 525 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 NRLP54845 237 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 ARL4CP56559 192 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
CD44-209ENST00000433892 CCDC15Q0P6D6 951 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 MOGSQ13724 837 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 SETDB1Q15047 1291 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
CD44-209ENST00000433892 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 FAM182AQ5T1J6 154 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 VSIG1Q86XK7 387 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 NAT8LQ8N9F0 302 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 TRPM4Q8TD43 1214 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 NLRP4Q96MN2 994 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 LRRC37BQ96QE4 947 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 WDR83Q9BRX9 315 aaKnown RBP12.39□□□□□ -0.43
CD44-209ENST00000433892 CXorf56Q9H5V9 222 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
CD44-209ENST00000433892 ZBTB42B2RXF5 422 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 ARIH2O95376 493 aa12.39□□□□□ -0.43
CD44-209ENST00000433892 ANP32DO95626 131 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms