RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 TTC16Q8NEE8 873 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 KCNV2Q8TDN2 545 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 GIPC2Q8TF65 315 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 CRELD1Q96HD1 420 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 FCRL3Q96P31 734 aaPredicted RBP17.08■□□□□ 0.32
NUP50-209ENST00000432340 AGXT2Q9BYV1 514 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.32
NUP50-209ENST00000432340 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
NUP50-209ENST00000432340 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.07■□□□□ 0.32
NUP50-209ENST00000432340 CBFA2T3O75081 653 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 CDKL5O76039 1030 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 APODP05090 189 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 HLA-EP13747 358 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 PSMA5P28066 241 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 NMT1P30419 496 aaKnown RBP17.07■□□□□ 0.32
NUP50-209ENST00000432340 EIF2DP41214 584 aaKnown RBP17.07■□□□□ 0.32
NUP50-209ENST00000432340 TXKP42681 527 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 EVCP57679 992 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 IL27RAQ6UWB1 636 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 NUDT18Q6ZVK8 323 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 GPR155Q7Z3F1 870 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 OR2I1PQ8NGU4 316 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 BAP1Q92560 729 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 NXPE2Q96DL1 559 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
NUP50-209ENST00000432340 PNKPQ96T60 521 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 TUBGCP4Q9UGJ1 667 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 KCNG1Q9UIX4 513 aa17.07■□□□□ 0.32
NUP50-209ENST00000432340 EML5Q05BV3 1969 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 NUP210Q8TEM1 1887 aaPredicted RBP17.06■□□□□ 0.32
NUP50-209ENST00000432340 STK36Q9NRP7 1315 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 CER1O95813 267 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
NUP50-209ENST00000432340 TCF3P15923 654 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 USP4Q13107 963 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 SUZ12Q15022 739 aaKnown RBP17.06■□□□□ 0.32
NUP50-209ENST00000432340 KYAT1Q16773 422 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 TMEM150AQ86TG1 271 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 DCP1BQ8IZD4 617 aaKnown RBP17.06■□□□□ 0.32
NUP50-209ENST00000432340 TRIML1Q8N9V2 468 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 THADAQ6YHU6 1953 aa17.06■□□□□ 0.32
NUP50-209ENST00000432340 A0A087WWV3 80 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 SGK1O00141 431 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 SLC9A3R1O14745 358 aaPredicted RBP17.05■□□□□ 0.32
NUP50-209ENST00000432340 FLRT2O43155 660 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 NEMFO60524 1076 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 NDUFS2O75306 463 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 TOM1L1O75674 476 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 NTRK1P04629 796 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 SPATA31C1P0DKV0 1188 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 HARSP12081 509 aaKnown RBP17.05■□□□□ 0.32
NUP50-209ENST00000432340 MUTP22033 750 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 PROZP22891 400 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 TIE1P35590 1138 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 OPRD1P41143 372 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 STRN3Q13033 797 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 KCNB1Q14721 858 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 NOLC1Q14978 699 aaKnown RBP eCLIP17.05■□□□□ 0.32
NUP50-209ENST00000432340 SLC10A6Q3KNW5 377 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 FRMD1Q8N878 549 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 HSPA12BQ96MM6 686 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
NUP50-209ENST00000432340 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
NUP50-209ENST00000432340 MAGED2Q9UNF1 606 aaPredicted RBP17.05■□□□□ 0.32
NUP50-209ENST00000432340 DKK1O94907 266 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 KAT7O95251 611 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 GRIA2P42262 883 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 TNFRSF4P43489 277 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 RPL10AP62906 217 aaKnown RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 PPP2R3AQ06190 1150 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 SCRN1Q12765 414 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 GRIK2Q13002 908 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 SH3RF2Q8TEC5 729 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 SENP8Q96LD8 212 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 ABI2Q9NYB9 513 aaPredicted RBP17.04■□□□□ 0.32
NUP50-209ENST00000432340 PCDHB5Q9Y5E4 795 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 PCDHGB2Q9Y5G2 931 aa17.04■□□□□ 0.32
NUP50-209ENST00000432340 ERVH48-1M5A8F1 160 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 CYP11A1P05108 521 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 CLTAP09496 248 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.32
NUP50-209ENST00000432340 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
NUP50-209ENST00000432340 PFKLP17858 780 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 RPA1P27694 616 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 LILRA4P59901 499 aa17.03■□□□□ 0.32
NUP50-209ENST00000432340 TAF1BQ53T94 588 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms