RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 P4HA2O15460 535 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 PRPF4O43172 522 aaKnown RBP eCLIP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TGFB1I1O43294 461 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ECEL1O95672 775 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 GOLGA8HP0CJ92 632 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NAT2P11245 290 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 GAP43P17677 238 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 FGFR4P22455 802 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 PSMC2P35998 433 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 CAP2P40123 477 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 IFNAR2P48551 515 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 FMO5P49326 533 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 CDK8P49336 464 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 GTF2IP78347 998 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 CALCOCO2Q13137 446 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 PTK6Q13882 451 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 MPP2Q14168 576 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 STAT4Q14765 748 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 DRAP1Q14919 205 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SLC45A4Q5BKX6 768 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SEL1L2Q5TEA6 688 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 OR52E8Q6IFG1 317 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 CXorf57Q6NSI4 855 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 C1orf122Q6ZSJ8 110 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NECAB2Q7Z6G3 386 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 KIF2BQ8N4N8 673 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 DENND1AQ8TEH3 1009 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ZFPM2Q8WW38 1151 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 MAIP1Q8WWC4 291 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ANAPC16Q96DE5 110 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TGS1Q96RS0 853 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SMAD5Q99717 465 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 FAM167BQ9BTA0 163 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 THAP2Q9H0W7 228 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SENP1Q9P0U3 644 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 WDR35Q9P2L0 1181 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 APEX2Q9UBZ4 518 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NKX1-2Q9UD57 310 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 DBR1Q9UK59 544 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 LRCH1Q9Y2L9 728 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ASTN2O75129 1339 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 MAPK13O15264 365 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 T-ENOLP0DO92 83 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 BRAFP15056 766 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 GM2AP17900 193 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SP100P23497 879 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ALDH3A1P30838 453 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 IL9RQ01113 521 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 COL9A2Q14055 689 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 GSTA3Q16772 222 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 Q4G0T1 1027 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TMEM63BQ5T3F8 832 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 UBAP2Q5T6F2 1119 aaKnown RBP8.49□□□□□ -1.05
VTI1A-202ENST00000432306 THEMIS2Q5TEJ8 643 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 C1orf228Q6PIY5 440 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ZBTB46Q86UZ6 589 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ANKRD35Q8N283 1001 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 UBR7Q8N806 425 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 LMO3Q8TAP4 145 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NCSTNQ92542 709 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 MAML1Q92585 1016 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ITFG2Q969R8 447 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 AZIN2Q96A70 460 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 ZNF333Q96JL9 665 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 SYT15Q9BQS2 421 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TUBB6Q9BUF5 446 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TIPINQ9BVW5 301 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 YIPF3Q9GZM5 350 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 FAM192AQ9GZU8 254 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 VCXQ9H320 206 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 KCNQ5Q9NR82 932 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 STOML1Q9UBI4 398 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 FBXO10Q9UK96 956 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 DNAJC12Q9UKB3 198 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 CHKBQ9Y259 395 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NEU2Q9Y3R4 380 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 TRIM17Q9Y577 477 aa8.49□□□□□ -1.05
VTI1A-202ENST00000432306 NAV1Q8NEY1 1877 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ZMYM2Q9UBW7 1377 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 WTIPA6NIX2 430 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ENO4A6NNW6 628 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ANKRD63C9JTQ0 380 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 J3KRW8 73 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 C2CD2LO14523 706 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 MED24O75448 989 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 S1PR4O95977 384 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SPATA31C1P0DKV0 1188 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SETSIPP0DME0 302 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 KRT13P13646 458 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 RAC2P15153 192 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 PTPN4P29074 926 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 STX2P32856 288 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 PTDSS1P48651 473 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 RAD23BP54727 409 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 GPC5P78333 572 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms