RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 PCBP1Q15365 356 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00309-201ENST00000431020 C1orf220Q5T0J3 134 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 C1QTNF12Q5T7M4 302 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 DHX40Q8IX18 779 aaKnown RBP6.33□□□□□ -1.4
LINC00309-201ENST00000431020 NEK11Q8NG66 645 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 RSAD2Q8WXG1 361 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 B3GNT5Q9BYG0 378 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 NSUN3Q9H649 340 aaKnown RBP6.33□□□□□ -1.4
LINC00309-201ENST00000431020 PLEKHA5Q9HAU0 1116 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 TMEM8AQ9HCN3 771 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 MRPS23Q9Y3D9 190 aaKnown RBP6.33□□□□□ -1.4
LINC00309-201ENST00000431020 FAM186AA6NE01 2351 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 COL4A6Q14031 1691 aa6.33□□□□□ -1.4
LINC00309-201ENST00000431020 M0QYV0 167 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 FOXN3O00409 490 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TBX10O75333 385 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SEC24AO95486 1093 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TBX18O95935 607 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 C4BPAP04003 597 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CFHP08603 1231 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CTSAP10619 480 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 KCNE1P15382 129 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 GABRR2P28476 465 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 GTF2H1P32780 548 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 DRAP1Q14919 205 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ZKSCAN8Q15776 578 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 MAN2A1Q16706 1144 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TTC30AQ86WT1 665 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 MYLPFQ96A32 169 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TCEAL4Q96EI5 215 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PIEZO1Q92508 2521 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 BEST1O76090 585 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 GJB6O95452 261 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 MOCS2O96007 188 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PIGRP01833 764 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ERCC5P28715 1186 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CACNA2D1P54289 1103 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SURF1Q15526 300 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 NAB2Q15742 525 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CDO1Q16878 200 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 BMT2Q1RMZ1 405 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PPP1R26Q5T8A7 1209 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 KIAA0319Q5VV43 1072 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PTCRAQ6ISU1 281 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CLEC17AQ6ZS10 378 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SLC47A2Q86VL8 602 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CACUL1Q86Y37 369 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CPA5Q8WXQ8 436 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CLP1Q92989 425 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CCDC97Q96F63 343 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 MFSD14AQ96MC6 490 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 KLHL5Q96PQ7 755 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 NIF3L1Q9GZT8 377 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PRO3102Q9H379 93 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 DEF6Q9H4E7 631 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 HESX1Q9UBX0 185 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ITGA11Q9UKX5 1188 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CELSR3Q9NYQ7 3312 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 DMDP11532 3685 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TDRD15B5MCY1 1934 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SLC26A4O43511 780 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ANXA13P27216 316 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ARID5BQ14865 1188 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ATAT1Q5SQI0 421 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 FAM182AQ5T1J6 154 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CYP4A22Q5TCH4 519 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 TRIM59Q8IWR1 403 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SCUBE3Q8IX30 993 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CRIPAKQ8N1N5 446 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 B3GALNT2Q8NCR0 500 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ENOX1Q8TC92 643 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 NT5C1AQ9BXI3 368 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 SMOC2Q9H3U7 446 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 NGRNQ9NPE2 291 aaKnown RBP6.32□□□□□ -1.4
LINC00309-201ENST00000431020 DMAC2Q9NW81 257 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 PLK2Q9NYY3 685 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 CABIN1Q9Y6J0 2220 aa6.32□□□□□ -1.4
LINC00309-201ENST00000431020 ARID2Q68CP9 1835 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 PIRO00625 290 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 INPPL1O15357 1258 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 PTPN1P18031 435 aaKnown RBP6.31□□□□□ -1.4
LINC00309-201ENST00000431020 PON1P27169 355 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 RPL9P32969 192 aaKnown RBP6.31□□□□□ -1.4
LINC00309-201ENST00000431020 ABCD1P33897 745 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 VIPR2P41587 438 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 ELAVL2Q12926 359 aaKnown RBP6.31□□□□□ -1.4
LINC00309-201ENST00000431020 CUL2Q13617 745 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
LINC00309-201ENST00000431020 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 CACTIN-AS1Q8N1I8 211 aa6.31□□□□□ -1.4
LINC00309-201ENST00000431020 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
LINC00309-201ENST00000431020 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms