RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PSMD6Q15008 389 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 THEM5Q8N1Q8 247 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 MAB21L3Q8N8X9 362 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 KCNG4Q8TDN1 519 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 ACBD6Q9BR61 282 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 XYLT2Q9H1B5 865 aa12.64□□□□□ -0.39
HDAC4-202ENST00000430200 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-202ENST00000430200 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ANTXRLA6NF34 631 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ZNF233A6NK53 670 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 DLATP10515 647 aaKnown RBP12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ARSAP15289 507 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 PFKFB1P16118 471 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 CDC25CP30307 473 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ZXDBP98169 803 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 STK4Q13043 487 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
HDAC4-202ENST00000430200 PON2Q15165 354 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
HDAC4-202ENST00000430200 TMEM86AQ8N2M4 240 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 SDCBP2Q9H190 292 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 LMAN1LQ9HAT1 526 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 ABCB6Q9NP58 842 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-202ENST00000430200 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
HDAC4-202ENST00000430200 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 A0A1B0GVL5 298 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 K7ESF4 209 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 TNNC2P02585 160 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 WARSP23381 471 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 WEE1P30291 646 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 MAGEA9P43362 315 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 DLG4P78352 724 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 MYL7Q01449 175 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 USP4Q13107 963 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 CCINQ13939 588 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 ZNF77Q15935 545 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 TDRD10Q5VZ19 366 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 KIAA2013Q8IYS2 634 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 CACTINQ8WUQ7 758 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 PAGE5Q96GU1 130 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 MYRFLQ96LU7 910 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 CYP2S1Q96SQ9 504 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 EBF3Q9H4W6 596 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 SMYD3Q9H7B4 428 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 OBP2AQ9NY56 170 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 SMG5Q9UPR3 1016 aaKnown RBP12.62□□□□□ -0.39
HDAC4-202ENST00000430200 NUP205Q92621 2012 aa12.62□□□□□ -0.39
HDAC4-202ENST00000430200 PLXND1Q9Y4D7 1925 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 LRRIQ3A6PVS8 624 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-202ENST00000430200 MAN2B1O00754 1011 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 KIAA0391O15091 583 aaKnown RBP12.61□□□□□ -0.39
HDAC4-202ENST00000430200 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
HDAC4-202ENST00000430200 VNN1O95497 513 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 FGF19O95750 216 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 PDGFRBP09619 1106 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 BDNFP23560 247 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 KPNA1P52294 538 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-202ENST00000430200 MYL6P60660 151 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 SMARCB1Q12824 385 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 DUOXA2Q1HG44 320 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 C1orf220Q5T0J3 134 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
HDAC4-202ENST00000430200 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 CSGALNACT1Q8TDX6 532 aa12.61□□□□□ -0.39
HDAC4-202ENST00000430200 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms