RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 EEF2KMTQ96G04 330 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 MED15Q96RN5 788 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 DUSP9Q99956 384 aaKnown RBP18.16■□□□□ 0.5
UBE3D-204ENST00000430071 ATXN3LQ9H3M9 355 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 KIAA1586Q9HCI6 787 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 KANSL1LA0AUZ9 987 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 MYBPHLA2RUH7 354 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 GABRDO14764 452 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 CYP2F1P24903 491 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 GDI1P31150 447 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 STX17P56962 302 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 PAK1Q13153 545 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 UBXN2BQ14CS0 331 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 DUOXA2Q1HG44 320 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 TPRG1Q6ZUI0 275 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 LIMS2Q7Z4I7 341 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 FRMD5Q7Z6J6 570 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 ARID3BQ8IVW6 561 aaPredicted RBP18.15■□□□□ 0.5
UBE3D-204ENST00000430071 ZC3H3Q8IXZ2 948 aaKnown RBP18.15■□□□□ 0.5
UBE3D-204ENST00000430071 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 LEMD2Q8NC56 503 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 FAM200AQ8TCP9 573 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 SPPL2BQ8TCT7 592 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 TSG101Q99816 390 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 TRPV4Q9HBA0 871 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 ASB3Q9Y575 518 aa18.15■□□□□ 0.5
UBE3D-204ENST00000430071 AKAP3O75969 853 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 TNNC2P02585 160 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 TARSP26639 723 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 TUFMP49411 452 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 ADAM9Q13443 819 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 FZD5Q13467 585 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 PSMD6Q15008 389 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 DDR2Q16832 855 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 INTS6LQ5JSJ4 861 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 GPR158Q5T848 1215 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 ASCL5Q7RTU5 278 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 WDR49Q8IV35 697 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 DCP1BQ8IZD4 617 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 CGRRF1Q99675 332 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 ACBD6Q9BR61 282 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 TRMT61BQ9BVS5 477 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 SMG9Q9H0W8 520 aaKnown RBP18.14■□□□□ 0.49
UBE3D-204ENST00000430071 BRD9Q9H8M2 597 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 LTB4R2Q9NPC1 389 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 PCDHB5Q9Y5E4 795 aa18.14■□□□□ 0.49
UBE3D-204ENST00000430071 GVINP1Q7Z2Y8 2422 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 FRYLO94915 3013 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 FAM170BA6NMN3 283 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 PRAMEF12O95522 483 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 PSMC3P17980 439 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 TNNI1P19237 187 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 RPL13P26373 211 aaKnown RBP18.13■□□□□ 0.49
UBE3D-204ENST00000430071 PSMC1P62191 440 aaKnown RBP18.13■□□□□ 0.49
UBE3D-204ENST00000430071 TSPY1Q01534 308 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 PFKPQ01813 784 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 PRKCQQ04759 706 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 SURF1Q15526 300 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 FOXR2Q6PJQ5 311 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 SASS6Q6UVJ0 657 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 MFSD6LQ8IWD5 586 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 TOP6BLQ8N6T0 577 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 ZFYVE19Q96K21 471 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 MRPL45Q9BRJ2 306 aaKnown RBP18.13■□□□□ 0.49
UBE3D-204ENST00000430071 CRTAC1Q9NQ79 661 aa18.13■□□□□ 0.49
UBE3D-204ENST00000430071 MYO16Q9Y6X6 1858 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 GPR179Q6PRD1 2367 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 ARNTLO00327 626 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 F11P03951 625 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 PDGFRBP09619 1106 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 NBL1P41271 181 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 ITIH5Q86UX2 942 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 MAML2Q8IZL2 1156 aaPredicted RBP18.12■□□□□ 0.49
UBE3D-204ENST00000430071 TMEM86AQ8N2M4 240 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
UBE3D-204ENST00000430071 SHDQ96IW2 340 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 SLC46A2Q9BY10 475 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 RWDD2AQ9UIY3 292 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
UBE3D-204ENST00000430071 BICDL2A1A5D9 508 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 CETN3O15182 167 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 TADA3O75528 432 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 SOX9P48436 509 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 MYL6P60660 151 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 DLG4P78352 724 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 FKBP3Q00688 224 aaKnown RBP18.11■□□□□ 0.49
UBE3D-204ENST00000430071 MYL7Q01449 175 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 TYRO3Q06418 890 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 MYO1EQ12965 1108 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 STX1AQ16623 288 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 C11orf57Q6ZUT1 292 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms