RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 MRPL17Q9NRX2 175 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 COL20A1Q9P218 1284 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 FBXL21Q9UKT6 434 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 PCDHB8Q9UN66 801 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TACC3Q9Y6A5 838 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ROBO3Q96MS0 1386 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MIF4GDA9UHW6 222 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC11A2P49281 568 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 KCNA1Q09470 495 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC18A3Q16572 532 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ITIH5Q86UX2 942 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 DNAAF5Q86Y56 855 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 GPR20Q99678 358 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC7A5P2Q9GIP4 190 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TRMT13Q9NUP7 481 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC25A13Q9UJS0 675 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC12A8A0AV02 714 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ACKR2O00590 384 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TLR2O60603 784 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MAFO75444 373 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ZWINTO95229 277 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SYF2O95926 243 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MT-ND3P03897 115 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 VDRP11473 427 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 HSPA6P17066 643 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SLC1A1P43005 524 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 HSDL1Q3SXM5 330 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 PLPP4Q5VZY2 271 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ITPRIPL1Q6GPH6 555 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CCDC137Q6PK04 289 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 PARP9Q8IXQ6 854 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 LRRC43Q8N309 656 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 FIBCD1Q8N539 461 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ENGASEQ8NFI3 743 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 FEZF2Q8TBJ5 459 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CENPKQ9BS16 269 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MRPL9Q9BYD2 267 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 RNPEPQ9H4A4 650 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TLR8Q9NR97 1041 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 WDR35Q9P2L0 1181 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 F8W8V4 182 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CCL5P13501 91 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 SYN1P17600 705 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ITGB5P18084 799 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 BDNFP23560 247 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 NR1H3Q13133 447 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ZNF177Q13360 481 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CCDC157Q569K6 752 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 NOL9Q5SY16 702 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 LBX2Q6XYB7 198 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ARHGEF19Q8IW93 802 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CCDC197Q8NCU1 140 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 DDI1Q8WTU0 396 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 F5H5T6 163 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 P4HA2O15460 535 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CALCAP01258 141 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 HOXC6P09630 235 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ACRP10323 421 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 MAPTP10636 758 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TKTL1P51854 596 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ARL4CP56559 192 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 DLG4P78352 724 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 PRAMEP78395 509 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ITGB3BPQ13352 177 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 HABP4Q5JVS0 413 aaKnown RBP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 KLC3Q6P597 504 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 EFHBQ8N7U6 833 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 ZNF507Q8TCN5 953 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 CLEC4DQ8WXI8 215 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-204ENST00000429774 TRPM5Q9NZQ8 1165 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 FRMPD4Q14CM0 1322 aa7.43□□□□□ -1.22
ATXN3-204ENST00000429774 C10orf71Q711Q0 1435 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 EIF4E1BA6NMX2 242 aaKnown RBP7.42□□□□□ -1.22
ATXN3-204ENST00000429774 B4GALT5O43286 388 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 FGRP09769 529 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 AVPR1AP37288 418 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 CRYBB1P53674 252 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-204ENST00000429774 RPL10AP62906 217 aaKnown RBP7.42□□□□□ -1.22
ATXN3-204ENST00000429774 NOMO2Q5JPE7 1267 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 TRIM65Q6PJ69 517 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 PDIK1LQ8N165 341 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 CXorf38Q8TB03 319 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 LRRC8CQ8TDW0 803 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 SYT15Q9BQS2 421 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 THAP2Q9H0W7 228 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 MARF1Q9Y4F3 1742 aaKnown RBP7.42□□□□□ -1.22
ATXN3-204ENST00000429774 MAP3K6O95382 1288 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 TROVE2P10155 538 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-204ENST00000429774 SERPINB6P35237 376 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 PSMD6Q15008 389 aa7.42□□□□□ -1.22
ATXN3-204ENST00000429774 CAPRIN2Q6IMN6 1127 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms