RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 FUBP3Q96I24 572 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTSD-203ENST00000429746 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
CTSD-203ENST00000429746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.6■□□□□ 0.573e-10■□□□□ 10.9
CTSD-203ENST00000429746 CDH7Q9ULB5 785 aa18.6■□□□□ 0.57
CTSD-203ENST00000429746 R3HCC1Q9Y3T6 440 aaKnown RBP18.6■□□□□ 0.57
CTSD-203ENST00000429746 MICAL2O94851 1124 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 FCARP24071 287 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 MAGEA11P43364 429 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 FMO5P49326 533 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 NUBP1P53384 320 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 DCAF17Q5H9S7 520 aaPredicted RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 SDHAF4Q5VUM1 108 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 DNAJB7Q7Z6W7 309 aaPredicted RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 UBR7Q8N806 425 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 ST13P5Q8NFI4 369 aaPredicted RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 GPR152Q8TDT2 470 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 ING5Q8WYH8 240 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 FGF14Q92915 247 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 TATDN2Q93075 761 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 SEPT5Q99719 369 aaPredicted RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 ARID3AQ99856 593 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 RPP25Q9BUL9 199 aaKnown RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 B3GNT5Q9BYG0 378 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 NIF3L1Q9GZT8 377 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 KCNK12Q9HB15 430 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 METTL14Q9HCE5 456 aaKnown RBP18.59■□□□□ 0.57
CTSD-203ENST00000429746 RAB20Q9NX57 234 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 TMEM63CQ9P1W3 806 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 COL4A2P08572 1712 aa18.59■□□□□ 0.57
CTSD-203ENST00000429746 NUP210Q8TEM1 1887 aaPredicted RBP18.58■□□□□ 0.57
CTSD-203ENST00000429746 TADA3O75528 432 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 GJA1P17302 382 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 PTPN1P18031 435 aaKnown RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 GBP2P32456 591 aaPredicted RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 TUFMP49411 452 aaKnown RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 PLD1Q13393 1074 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 DDR2Q16832 855 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 MGAT5BQ3V5L5 792 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 MDH1BQ5I0G3 518 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 B3GALNT2Q8NCR0 500 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 ZNF512Q96ME7 567 aaPredicted RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 ZSWIM3Q96MP5 696 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 MRPS23Q9Y3D9 190 aaKnown RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 ASB3Q9Y575 518 aa18.58■□□□□ 0.56
CTSD-203ENST00000429746 KIF26AQ9ULI4 1882 aaPredicted RBP18.58■□□□□ 0.56
CTSD-203ENST00000429746 A8MXQ7 604 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 CILPO75339 1184 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
CTSD-203ENST00000429746 ALDH1A3P47895 512 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 NDST1P52848 882 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 EPHB3P54753 998 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 ORC1Q13415 861 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 STXBP5Q5T5C0 1151 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 TCERG1LQ5VWI1 586 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 PARM1Q6UWI2 310 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 CRYBG2Q8N1P7 616 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 GIPC2Q8TF65 315 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 NXPE3Q969Y0 559 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 FAXDC2Q96IV6 333 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 ZNF518BQ9C0D4 1074 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 SNX25Q9H3E2 840 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 IGSF9Q9P2J2 1179 aa18.57■□□□□ 0.56
CTSD-203ENST00000429746 ZFP37Q9Y6Q3 630 aaPredicted RBP18.57■□□□□ 0.56
CTSD-203ENST00000429746 CLDN5O00501 218 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 STX10O60499 249 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 NOL4O94818 638 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 BDNFP23560 247 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 ERCC5P28715 1186 aaPredicted RBP18.56■□□□□ 0.56
CTSD-203ENST00000429746 PDZD4Q76G19 769 aaPredicted RBP18.56■□□□□ 0.56
CTSD-203ENST00000429746 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 FUKQ8N0W3 1084 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 MYRFLQ96LU7 910 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 ELOVL4Q9GZR5 314 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 CYP3A43Q9HB55 503 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 ASAH2Q9NR71 780 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 COL4A3Q01955 1670 aa18.56■□□□□ 0.56
CTSD-203ENST00000429746 KMT2EQ8IZD2 1858 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 A0A1W2PRU2 124 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 MBD3O95983 291 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 F11P03951 625 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 MYL4P12829 197 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 KCNH2Q12809 1159 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 TEAD2Q15562 447 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 CCDC40Q4G0X9 1142 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 IQCEQ6IPM2 695 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 VSTM1Q6UX27 236 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 ACOT1Q86TX2 421 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 SPATA2LQ8IUW3 424 aaPredicted RBP18.55■□□□□ 0.56
CTSD-203ENST00000429746 SLC44A3Q8N4M1 653 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 C12orf29Q8N999 325 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 LEMD2Q8NC56 503 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 ZMIZ2Q8NF64 920 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 RSPRY1Q96DX4 576 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 MCRS1Q96EZ8 462 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 CNOT6LQ96LI5 555 aaKnown RBP18.55■□□□□ 0.56
CTSD-203ENST00000429746 IRF2BPLQ9H1B7 796 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 GDE1Q9NZC3 331 aa18.55■□□□□ 0.56
CTSD-203ENST00000429746 MAGEC2Q9UBF1 373 aaPredicted RBP18.55■□□□□ 0.56
CTSD-203ENST00000429746 NUMBLQ9Y6R0 609 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms