RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PDCD10Q9BUL8 212 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TEX12Q9BXU0 123 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 VPS11Q9H270 941 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 EMILIN3Q9NT22 766 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SMARCAL1Q9NZC9 954 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SLC8A2Q9UPR5 921 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ECM29Q5VYK3 1845 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CYP2D7A0A087X1C5 515 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TGM6O95932 706 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PPIL2Q13356 520 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PLEKHA7Q6IQ23 1121 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ARHGEF19Q8IW93 802 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SELENONQ9NZV5 590 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ESYT3A0FGR9 886 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TGDSO95455 350 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 S100A6P06703 90 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CYP2C9P11712 490 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CCDC157Q569K6 752 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 BICRALQ6AI39 1079 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TMEM53Q6P2H8 277 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ARCQ7LC44 396 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ANKS1AQ92625 1134 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 HNRNPABQ99729 332 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ARMC1Q9NVT9 282 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 EHD3Q9NZN3 535 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 LNPEPQ9UIQ6 1025 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PCDHA1Q9Y5I3 950 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 DRD4P21917 467 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CA8P35219 290 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 YAP1P46937 504 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 FXR1P51114 621 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ODR4Q5SWX8 454 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 FAM102BQ5T8I3 360 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CCNJLQ8IV13 435 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 NSMCE4AQ9NXX6 385 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PRPF19Q9UMS4 504 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 RNF103-CHMP3A0A140T963 221 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CLIC2O15247 247 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ADCY6O43306 1168 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ITIH1P19827 911 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 M6PRP20645 277 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 GUCY1A2P33402 732 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 MYL6P60660 151 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 NAB1Q13506 487 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 MDH1BQ5I0G3 518 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TCEAL7Q9BRU2 100 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 NALCNQ8IZF0 1738 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNF829Q3KNS6 432 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SNAP47Q5SQN1 464 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 GET4Q7L5D6 327 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 KRT26Q7Z3Y9 468 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TCAIMQ8N3R3 496 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SRBD1Q8N5C6 995 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 AADATQ8N5Z0 425 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TPCN2Q8NHX9 752 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 RIN2Q8WYP3 895 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 UQCC2Q9BRT2 126 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ADAM30Q9UKF2 790 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNF233A6NK53 670 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNF568Q3ZCX4 644 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TMCO6Q96DC7 493 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CDHR1Q96JP9 859 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TINF2Q9BSI4 451 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 AZI2Q9H6S1 392 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PNPLA8Q9NP80 782 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 UBE2TQ9NPD8 197 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TMEM114B3SHH9 223 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CYP4F22Q6NT55 531 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SFRP1Q8N474 314 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 L3MBTL3Q96JM7 780 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CEP170P1Q96L14 293 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ECSITQ9BQ95 431 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 CLK4Q9HAZ1 481 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ARHGEF37A1IGU5 675 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 NCK2O43639 380 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 IL6STP40189 918 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 KPNA1P52294 538 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 HPCAP84074 193 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 C16orf72Q14CZ0 275 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 KCTD21Q4G0X4 260 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 WDR36Q8NI36 951 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 ASZ1Q8WWH4 475 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 CDH19Q9H159 772 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 CAPN6Q9Y6Q1 641 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 A0A1W2PRG6 482 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 MFAP3P55082 362 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 PTENP60484 403 aa7.82□□□□□ -1.16
SYNPO2-202ENST00000429713 PTK2Q05397 1052 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms