RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.3□□□□□ -0.28
LDB3-205ENST00000429277 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 P3H2Q8IVL5 708 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 OTULINQ96BN8 352 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 TRMT6Q9UJA5 497 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 RSPH10B2B2RC85 870 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 RSPH10BP0C881 870 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 GTF2A2P52657 109 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CYTH1Q15438 398 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 C4orf33Q8N1A6 199 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 METTL5Q9NRN9 209 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 CHRM3P20309 590 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 BLVRAP53004 296 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CACHD1Q5VU97 1274 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 TMEM120BA0PK00 339 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 RAD51CO43502 376 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ALDH1A2O94788 518 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 NPTXRO95502 500 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CYP2B6P20813 491 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CAPZA2P47755 286 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ZRANB3Q5FWF4 1079 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 DEPDC1Q5TB30 811 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 SLC13A5Q86YT5 568 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 MS4A14Q96JA4 679 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 DRG1Q9Y295 367 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 GCLCP48506 637 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 MCL1Q07820 350 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 CDH18Q13634 790 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 PCSK7Q16549 785 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 KYNUQ16719 465 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ERP27Q96DN0 273 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 DTNAQ9Y4J8 743 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ZNF185O15231 689 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 GUCA1CO95843 209 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 EPHB2P29323 1055 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 RPL10AP62906 217 aaKnown RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 APLFQ8IW19 511 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 HES6Q96HZ4 224 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 NSL1Q96IY1 281 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 C17orf80Q9BSJ5 609 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 FAM167BQ9BTA0 163 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ILKAPQ9H0C8 392 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 MYO1GB0I1T2 1018 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 ACTN3Q08043 901 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ZC2HC1CQ53FD0 456 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 LVRNQ6Q4G3 990 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 NLRP9Q7RTR0 991 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 HNRNPLLQ8WVV9 542 aaKnown RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 SEC16BQ96JE7 1060 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ZSWIM1Q9BR11 485 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 MROH8Q9H579 483 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 WDCPQ9H6R7 721 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 TBC1D23Q9NUY8 699 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 DPP7Q9UHL4 492 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 SLCO1B7G3V0H7 640 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 KPNA6O60684 536 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 GZMAP12544 262 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 ALDH7A1P49419 539 aaKnown RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
LDB3-205ENST00000429277 UNC45BQ8IWX7 931 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 TMEM169Q96HH4 297 aa13.29□□□□□ -0.28
LDB3-205ENST00000429277 C1orf167Q5SNV9 1468 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 VPS26AO75436 327 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 LSM8O95777 96 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 PGK2P07205 417 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 TARS2Q9BW92 718 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 RMND5AQ9H871 391 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 UTP6Q9NYH9 597 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 WWOXQ9NZC7 414 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 SOX13Q9UN79 622 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 F5H5T6 163 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 PRLRP16471 622 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 LRRC6Q86X45 466 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 EPB41L4AQ9HCS5 686 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms