RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FAM126AQ9BYI3 521 aaPredicted RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 BLZF1Q9H2G9 400 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 ABCB6Q9NP58 842 aa18.32■□□□□ 0.52
TRIM39-209ENST00000428728 THG1LQ9NWX6 298 aaKnown RBP18.32■□□□□ 0.52
TRIM39-209ENST00000428728 UBE4BO95155 1302 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 CLIC2O15247 247 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 ATP2C2O75185 946 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 TADA3O75528 432 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 F13A1P00488 732 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 DLATP10515 647 aaKnown RBP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 DDX6P26196 483 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 CXCL12P48061 93 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 LHX1P48742 406 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 SURF1Q15526 300 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 LPAL2Q16609 132 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 ITPRIPL2Q3MIP1 535 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 TRIM68Q6AZZ1 485 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 EPM2AIP1Q7L775 607 aaPredicted RBP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 WDR49Q8IV35 697 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 RDH13Q8NBN7 331 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 TTC16Q8NEE8 873 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 USP13Q92995 863 aaPredicted RBP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 SYT15Q9BQS2 421 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 TRPC7Q9HCX4 862 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 AGPAT3Q9NRZ7 376 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 GKN1Q9NS71 199 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 UXTQ9UBK9 157 aaPredicted RBP18.31■□□□□ 0.52
TRIM39-209ENST00000428728 ZMYM5Q9UJ78 669 aa18.31■□□□□ 0.52
TRIM39-209ENST00000428728 SPAG17Q6Q759 2223 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 GABRDO14764 452 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 NOL4O94818 638 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 NRLP54845 237 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 SNRNP35Q16560 246 aaKnown RBP18.3■□□□□ 0.52
TRIM39-209ENST00000428728 DUOXA2Q1HG44 320 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 UNC13DQ70J99 1090 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 SPEM1Q8N4L4 309 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 RIN3Q8TB24 985 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 KBTBD7Q8WVZ9 684 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 SECISBP2LQ93073 1101 aaKnown RBP18.3■□□□□ 0.52
TRIM39-209ENST00000428728 C7orf25Q9BPX7 421 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 EBF3Q9H4W6 596 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 KIF9Q9HAQ2 790 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 MAGEF1Q9HAY2 307 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 HPS4Q9NQG7 708 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 TDP1Q9NUW8 608 aa18.3■□□□□ 0.52
TRIM39-209ENST00000428728 CHURC1-FNTBB4DL54 471 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 TNNI1P19237 187 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 LMO2P25791 158 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 AFMP43652 599 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 ME1P48163 572 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 FNTBP49356 437 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 DMWDQ09019 674 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 CFAP221Q4G0U5 840 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 DGKKQ5KSL6 1271 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 HEATR6Q6AI08 1181 aaKnown RBP18.29■□□□□ 0.52
TRIM39-209ENST00000428728 CNNM4Q6P4Q7 775 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 MAMSTRQ6ZN01 415 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 PRR23BQ6ZRT6 265 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 ERMP1Q7Z2K6 904 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 MON1AQ86VX9 555 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 SCFD1Q8WVM8 642 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 MYLPFQ96A32 169 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 FNBP1Q96RU3 617 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 C2orf42Q9NWW7 574 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 FAM13BQ9NYF5 915 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 RAB23Q9ULC3 237 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 DMXL1Q9Y485 3027 aa18.29■□□□□ 0.52
TRIM39-209ENST00000428728 PDGFRBP09619 1106 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 ARSAP15289 507 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 FOXK2Q01167 660 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CYP24A1Q07973 514 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 EHHADHQ08426 723 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 PKP1Q13835 747 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CCINQ13939 588 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CC2D1AQ6P1N0 951 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-209ENST00000428728 C4orf50Q6ZRC1 276 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 TRAPPC11Q7Z392 1133 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 GRAMD1CQ8IYS0 662 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 TRMT2BQ96GJ1 504 aaKnown RBP18.28■□□□□ 0.52
TRIM39-209ENST00000428728 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM39-209ENST00000428728 FAM83CQ9BQN1 747 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 SLC39A2Q9NP94 309 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CRTAC1Q9NQ79 661 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 GMEB2Q9UKD1 530 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
TRIM39-209ENST00000428728 CEP250Q9BV73 2442 aa18.27■□□□□ 0.52
TRIM39-209ENST00000428728 OTOL1A6NHN0 477 aaPredicted RBP18.27■□□□□ 0.52
TRIM39-209ENST00000428728 CKMP06732 381 aa18.27■□□□□ 0.52
TRIM39-209ENST00000428728 WARSP23381 471 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms