RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 PKMYT1Q99640 499 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 CBWD1Q9BRT8 395 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 PDE11AQ9HCR9 933 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 SIX4Q9UIU6 781 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 SLC8A2Q9UPR5 921 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 SNX9Q9Y5X1 595 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 WNT6Q9Y6F9 365 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 LAMA1P25391 3075 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 MYO16Q9Y6X6 1858 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 A0A087X0B3 334 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 PRPF6O94906 941 aaKnown RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 CSH1P0DML2 217 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 CSH2P0DML3 217 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 IDEP14735 1019 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 GJA4P35212 333 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 INTS6LQ5JSJ4 861 aaKnown RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 CC2D1AQ6P1N0 951 aaPredicted RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 BRSK2Q8IWQ3 736 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 SCN4BQ8IWT1 228 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 ARL14EPQ8N8R7 260 aaPredicted RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 ACBD6Q9BR61 282 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 LINC00597Q9H2U6 94 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 RBAKQ9NYW8 714 aaPredicted RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 INVSQ9Y283 1065 aa17.78■□□□□ 0.44
VARS-216ENST00000428445 KMT2BQ9UMN6 2715 aaPredicted RBP17.78■□□□□ 0.44
VARS-216ENST00000428445 CNOT1A5YKK6 2376 aaKnown RBP17.77■□□□□ 0.44
VARS-216ENST00000428445 C2orf78A6NCI8 922 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 HUS1O60921 280 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
VARS-216ENST00000428445 LMO2P25791 158 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.44
VARS-216ENST00000428445 RAP1GAPP47736 663 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 MTF1Q14872 753 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 SV2BQ7L1I2 683 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 CACNA2D4Q7Z3S7 1137 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 SYCP3Q8IZU3 236 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 GLIS3Q8NEA6 775 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 RPLP0P6Q8NHW5 317 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 HVCN1Q96D96 273 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 P2RY13Q9BPV8 354 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 MTMR12Q9C0I1 747 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 ECT2Q9H8V3 914 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 DUS2Q9NX74 493 aaKnown RBP17.77■□□□□ 0.44
VARS-216ENST00000428445 CCDC39Q9UFE4 941 aa17.77■□□□□ 0.44
VARS-216ENST00000428445 MAP1BP46821 2468 aaKnown RBP17.77■□□□□ 0.43
VARS-216ENST00000428445 PTPRJQ12913 1337 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 NOL4O94818 638 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 PNPLA4P41247 253 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 PSMC1P62191 440 aaKnown RBP17.76■□□□□ 0.43
VARS-216ENST00000428445 PSMD2Q13200 908 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 ZNF77Q15935 545 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 NFE2Q16621 373 aaPredicted RBP17.76■□□□□ 0.43
VARS-216ENST00000428445 SOWAHAQ2M3V2 549 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 TCEAL6Q6IPX3 200 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 NT5DC4Q86YG4 428 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 SPATA2LQ8IUW3 424 aaPredicted RBP17.76■□□□□ 0.43
VARS-216ENST00000428445 ABCA7Q8IZY2 2146 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 OR5B17Q8NGF7 314 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
VARS-216ENST00000428445 TCEAL3Q969E4 200 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 STK17AQ9UEE5 414 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 EXOC7Q9UPT5 735 aa17.76■□□□□ 0.43
VARS-216ENST00000428445 SRPRBQ9Y5M8 271 aaKnown RBP17.76■□□□□ 0.43
VARS-216ENST00000428445 ATG13O75143 517 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 EPN2O95208 641 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 ZNF806P0C7X5 589 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 GAP43P17677 238 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
VARS-216ENST00000428445 ZXDBP98169 803 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 MYL7Q01449 175 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 N4BP2L1Q5TBK1 243 aaPredicted RBP17.75■□□□□ 0.43
VARS-216ENST00000428445 IL31Q6EBC2 164 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 ADGRF2Q8IZF7 708 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
VARS-216ENST00000428445 LEO1Q8WVC0 666 aaPredicted RBP17.75■□□□□ 0.43
VARS-216ENST00000428445 CHAMP1Q96JM3 812 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 KIF9Q9HAQ2 790 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 SEL1LQ9UBV2 794 aa17.75■□□□□ 0.43
VARS-216ENST00000428445 CHD8Q9HCK8 2581 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 TRAV19A0A0A6YYK7 116 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 GABRDO14764 452 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 SCAMP3O14828 347 aaKnown RBP17.74■□□□□ 0.43
VARS-216ENST00000428445 TM4SF5O14894 197 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 CKMP06732 381 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 PDGFRBP09619 1106 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 DRD1P21728 446 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 GARTP22102 1010 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 USP46P62068 366 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 RBP5P82980 135 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 FAM160A1Q05DH4 1040 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 RESTQ13127 1097 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 ZNF268Q14587 947 aaPredicted RBP17.74■□□□□ 0.43
VARS-216ENST00000428445 PDGFRLQ15198 375 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 EML3Q32P44 896 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 PLK5Q496M5 336 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 TMEM86AQ8N2M4 240 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms