RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 TACC1O75410 805 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 NOL4O94818 638 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 STAU1O95793 577 aaKnown RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 PDGFRBP09619 1106 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 FAM163BP0C2L3 166 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 PRR29P0C7W0 189 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 MAGEA9P43362 315 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 RPS9P46781 194 aaKnown RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 MLLT6P55198 1093 aaPredicted RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 MYL6P60660 151 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 CLDN10P78369 228 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 CMTM8Q8IZV2 173 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 PARD3BQ8TEW8 1205 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 FAM3CQ92520 227 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 NKD2Q969F2 451 aaPredicted RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 MYRFLQ96LU7 910 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 SMG9Q9H0W8 520 aaKnown RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 ZMYM5Q9UJ78 669 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 MAGED2Q9UNF1 606 aaPredicted RBP16.5■□□□□ 0.23
TSPO-204ENST00000428336 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
TSPO-204ENST00000428336 ZFHX2Q9C0A1 2572 aaPredicted RBP16.49■□□□□ 0.23
TSPO-204ENST00000428336 F5P12259 2224 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 PDXKO00764 312 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 DPYSL4O14531 572 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 NCAM2O15394 837 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 TADA3O75528 432 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 DDX6P26196 483 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSPO-204ENST00000428336 MAGEA11P43364 429 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 DPYDQ12882 1025 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 TRPC3Q13507 836 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 WDR72Q3MJ13 1102 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 TDRD10Q5VZ19 366 aaKnown RBP16.49■□□□□ 0.23
TSPO-204ENST00000428336 KRBA2Q6ZNG9 492 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 MAB21L3Q8N8X9 362 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 MYLPFQ96A32 169 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 TRMT2BQ96GJ1 504 aaKnown RBP16.49■□□□□ 0.23
TSPO-204ENST00000428336 ZFYVE19Q96K21 471 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
TSPO-204ENST00000428336 SPATA6Q9NWH7 488 aaPredicted RBP16.49■□□□□ 0.23
TSPO-204ENST00000428336 NDRG2Q9UN36 371 aaKnown RBP16.49■□□□□ 0.23
TSPO-204ENST00000428336 LRRIQ3A6PVS8 624 aaPredicted RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 SOBPA7XYQ1 873 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 NR3C1P04150 777 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 CCNE1P24864 410 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 ATICP31939 592 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 GNL1P36915 607 aaPredicted RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 TXNDC8Q6A555 127 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 MON1AQ86VX9 555 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 CELF5Q8N6W0 485 aaKnown RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 MYCBPAPQ8TBZ2 947 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 BPIFB1Q8TDL5 484 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 CSGALNACT1Q8TDX6 532 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 USP13Q92995 863 aaPredicted RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 VRTNQ9H8Y1 702 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 UXTQ9UBK9 157 aaPredicted RBP16.48■□□□□ 0.23
TSPO-204ENST00000428336 R4GN57 208 aa16.48■□□□□ 0.23
TSPO-204ENST00000428336 TCHHQ07283 1943 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 LAMTOR5O43504 91 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 ZNF202O95125 648 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 BDNFP23560 247 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 SOX9P48436 509 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 AP3M2P53677 418 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 TNNC1P63316 161 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 DLG4P78352 724 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 MAPRE1Q15691 268 aaKnown RBP16.47■□□□□ 0.23
TSPO-204ENST00000428336 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 OR6B3Q8NGW1 331 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 MRPS31Q92665 395 aaKnown RBP16.47■□□□□ 0.23
TSPO-204ENST00000428336 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
TSPO-204ENST00000428336 MSANTD3Q96H12 275 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 CHRDQ9H2X0 955 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 C8orf33Q9H7E9 229 aaPredicted RBP16.47■□□□□ 0.23
TSPO-204ENST00000428336 GTSE1Q9NYZ3 720 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 NXF1Q9UBU9 619 aaKnown RBP16.47■□□□□ 0.23
TSPO-204ENST00000428336 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 TRAF3IP3Q9Y228 551 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 CCL26Q9Y258 94 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 USP34Q70CQ2 3546 aa16.47■□□□□ 0.23
TSPO-204ENST00000428336 CACNA1IQ9P0X4 2223 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 COL4A2P08572 1712 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 PHACTR2O75167 634 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 VNN1O95497 513 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 CHRNB1P11230 501 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 AVPR1AP37288 418 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 GRIK1P39086 918 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 KPNA1P52294 538 aaPredicted RBP16.46■□□□□ 0.23
TSPO-204ENST00000428336 PLCB2Q00722 1185 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
TSPO-204ENST00000428336 TNK2Q07912 1038 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms