RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 HTRA3P83110 453 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 MFSD10Q14728 455 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 EFHC1Q5JVL4 640 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 MROH9Q5TGP6 573 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 FAM171A1Q5VUB5 890 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PCNX4Q63HM2 1172 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PKN3Q6P5Z2 889 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 C3orf62Q6ZUJ4 267 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 TRIM48Q8IWZ4 208 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 RUBCNLQ9H714 662 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PIH1D1Q9NWS0 290 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 CRLS1Q9UJA2 301 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 FAF1Q9UNN5 650 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 DGKIO75912 1065 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 RBP3P10745 1247 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 ACADSBP45954 432 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 DDX39BQ13838 428 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 SHROOM1Q2M3G4 852 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 EARS2Q5JPH6 523 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 CAPNS2Q96L46 248 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 TRABDQ9H4I3 376 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 CHST12Q9NRB3 414 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 DDX43Q9NXZ2 648 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 SNX12Q9UMY4 172 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 AURKCQ9UQB9 309 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 IFNA8P32881 189 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 GCKP35557 465 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 NAMPTP43490 491 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 SLC11A2P49281 568 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 VSNL1P62760 191 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 ERVK-9P63128 1117 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 ERVK-24P63145 666 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 SPATS2Q86XZ4 545 aaKnown RBP10.15□□□□□ -0.79
SNX13-203ENST00000428135 ZNF669Q96BR6 464 aaPredicted RBP10.15□□□□□ -0.79
SNX13-203ENST00000428135 ZBTB45Q96K62 511 aaPredicted RBP10.15□□□□□ -0.79
SNX13-203ENST00000428135 CENPKQ9BS16 269 aa10.15□□□□□ -0.79
SNX13-203ENST00000428135 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.79
SNX13-203ENST00000428135 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.15□□□□□ -0.79
SNX13-203ENST00000428135 F5H5T6 163 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ENO1P06733 434 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 TCN1P20061 433 aaPredicted RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 PON1P27169 355 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 CDH8P55286 799 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 PALB2Q86YC2 1186 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 TAS1R2Q8TE23 839 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 LCMT1Q9UIC8 334 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 VWDEQ8N2E2 1590 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 CBX4O00257 560 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 PHF2O75151 1096 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 NAB2Q15742 525 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 KCNF1Q9H3M0 494 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 SLC39A10Q9ULF5 831 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 TCP11X1B4DZS4 312 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 RHOBTB1O94844 696 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 HAUS5O94927 633 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ACVR2BQ13705 512 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 TMEM132BQ14DG7 1078 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 MEI1Q5TIA1 1274 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 CELF6Q96J87 481 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 UVRAGQ9P2Y5 699 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 PCDHB12Q9Y5F1 795 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 MRFAP1Q9Y605 127 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 DUSP10Q9Y6W6 482 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 GRID2IPA4D2P6 1211 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 MAP3K13O43283 966 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 DCTN3O75935 186 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 CALCAP01258 141 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 SETSIPP0DME0 302 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 PTPRAP18433 802 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 CARSP49589 748 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 EVX2Q03828 476 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ZSWIM2Q8NEG5 633 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 RIN2Q8WYP3 895 aaPredicted RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 TATDN2Q93075 761 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 SMAD5Q99717 465 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 OSGEPL1Q9H4B0 414 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 RAD18Q9NS91 495 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 VPS28Q9UK41 221 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 TRIM33Q9UPN9 1127 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 ROBO1Q9Y6N7 1651 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 SEC24DO94855 1032 aaPredicted RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 SOAT1P35610 550 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 FSCN1Q16658 493 aaKnown RBP10.14□□□□□ -0.79
SNX13-203ENST00000428135 ARMC6Q6NXE6 501 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 METTL7BQ6UX53 244 aa10.14□□□□□ -0.79
SNX13-203ENST00000428135 RRM2BQ7LG56 351 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms