RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 KNL1Q8NG31 2342 aa12.93□□□□□ -0.34
DDX39B-208ENST00000428098 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 PPEF2O14830 753 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 AP5Z1O43299 807 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 DTNBO60941 627 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 MED24O75448 989 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 PROZP22891 400 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 LRPAP1P30533 357 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 TIE1P35590 1138 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 SRSF1Q07955 248 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 SLC39A12Q504Y0 691 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 DSTYKQ6XUX3 929 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 CLMPQ9H6B4 373 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 COL6A6A6NMZ7 2263 aa12.92□□□□□ -0.34
DDX39B-208ENST00000428098 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
DDX39B-208ENST00000428098 A0A1W2PQD8 194 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 WNT7AO00755 349 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 DEXIO95424 95 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 MCF2P10911 925 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TYMPP19971 482 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 DDX6P26196 483 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TXKP42681 527 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 IFNAR2P48551 515 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 GPR15P49685 360 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 EVCP57679 992 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 KRT32Q14532 448 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 VEPH1Q14D04 833 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TAF12Q16514 161 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 ZC2HC1CQ53FD0 456 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 TRIML1Q8N9V2 468 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 BAHD1Q8TBE0 780 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
DDX39B-208ENST00000428098 PNMA5Q96PV4 448 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 CITO14578 2027 aa12.91□□□□□ -0.34
DDX39B-208ENST00000428098 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 TLX3O43711 291 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-208ENST00000428098 TADA3O75528 432 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
DDX39B-208ENST00000428098 MAOBP27338 520 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 ZXDBP98169 803 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 SCRN1Q12765 414 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 NR1H3Q13133 447 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 RABEPKQ7Z6M1 372 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
DDX39B-208ENST00000428098 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.34
DDX39B-208ENST00000428098 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
DDX39B-208ENST00000428098 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
DDX39B-208ENST00000428098 A0A0A0MRY4 1105 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 GABRG2P18507 467 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 LILRA4P59901 499 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 KCNC4Q03721 635 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 GRIK2Q13002 908 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 USP4Q13107 963 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 SH3RF2Q8TEC5 729 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 KCNB2Q92953 911 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-208ENST00000428098 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 HSPA12BQ96MM6 686 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
DDX39B-208ENST00000428098 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-208ENST00000428098 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
DDX39B-208ENST00000428098 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-208ENST00000428098 OBSL1O75147 1896 aa12.89□□□□□ -0.35
DDX39B-208ENST00000428098 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
DDX39B-208ENST00000428098 CAPN9O14815 690 aa12.88□□□□□ -0.35
DDX39B-208ENST00000428098 CXCL8P10145 99 aa12.88□□□□□ -0.35
DDX39B-208ENST00000428098 NPTX2P47972 431 aa12.88□□□□□ -0.35
DDX39B-208ENST00000428098 CALCRLQ16602 461 aa12.88□□□□□ -0.35
DDX39B-208ENST00000428098 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms