RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MAML2Q8IZL2 1156 aaPredicted RBP19.7■□□□□ 0.74
PSPC1-202ENST00000427943 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 TTC8Q8TAM2 541 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 CSGALNACT1Q8TDX6 532 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 FAM3CQ92520 227 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 MYLPFQ96A32 169 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 NELL2Q99435 816 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 MRPL45Q9BRJ2 306 aaKnown RBP19.7■□□□□ 0.74
PSPC1-202ENST00000427943 GOLPH3LQ9H4A5 285 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 CRTAC1Q9NQ79 661 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 CDH9Q9ULB4 789 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 NME7Q9Y5B8 376 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 MAN2B1O00754 1011 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 NCAM2O15394 837 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 LAMTOR5O43504 91 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 TADA3O75528 432 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 RPN1P04843 607 aaKnown RBP19.69■□□□□ 0.74
PSPC1-202ENST00000427943 CCNE1P24864 410 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 SOX9P48436 509 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 MYL6P60660 151 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 TNNC1P63316 161 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 PSMD2Q13200 908 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 FZD5Q13467 585 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 TRPC3Q13507 836 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 CFAP221Q4G0U5 840 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 TXNDC8Q6A555 127 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 FAM171BQ6P995 826 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 MAB21L3Q8N8X9 362 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 GOLGA5Q8TBA6 731 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 BPIFB1Q8TDL5 484 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 CLDN23Q96B33 292 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 KCTD10Q9H3F6 313 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
PSPC1-202ENST00000427943 FAM237AA0A1B0GTK4 181 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 LRRIQ3A6PVS8 624 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-202ENST00000427943 PHACTR2O75167 634 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 NOL4O94818 638 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 CLSTN1O94985 981 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 MAGEA9P43362 315 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 CYP27A1Q02318 531 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 BIRC3Q13489 604 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 WDR72Q3MJ13 1102 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 ARHGAP29Q52LW3 1261 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 TDRD10Q5VZ19 366 aaKnown RBP19.68■□□□□ 0.74
PSPC1-202ENST00000427943 C4orf50Q6ZRC1 276 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 CMTM8Q8IZV2 173 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 ZNF687Q8N1G0 1237 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 OR6B3Q8NGW1 331 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 MRPS31Q92665 395 aaKnown RBP19.68■□□□□ 0.74
PSPC1-202ENST00000427943 FUBP3Q96I24 572 aaKnown RBP eCLIP19.68■□□□□ 0.74
PSPC1-202ENST00000427943 SCAND2PQ9GZW5 306 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-202ENST00000427943 SNX25Q9H3E2 840 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 OBP2AQ9NY56 170 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 GTSE1Q9NYZ3 720 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 CCL26Q9Y258 94 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 FAM186AA6NE01 2351 aa19.68■□□□□ 0.74
PSPC1-202ENST00000427943 CFAP54Q96N23 3096 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 NR3C1P04150 777 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 MYL1P05976 194 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 BDNFP23560 247 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 WEE1P30291 646 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 AVPR1AP37288 418 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 RPS9P46781 194 aaKnown RBP19.67■□□□□ 0.74
PSPC1-202ENST00000427943 KPNA1P52294 538 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-202ENST00000427943 MDH1BQ5I0G3 518 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 CELF5Q8N6W0 485 aaKnown RBP19.67■□□□□ 0.74
PSPC1-202ENST00000427943 ELMO3Q96BJ8 720 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 DMAC2Q9NW81 257 aa19.67■□□□□ 0.74
PSPC1-202ENST00000427943 MAGEC2Q9UBF1 373 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-202ENST00000427943 NXF1Q9UBU9 619 aaKnown RBP19.67■□□□□ 0.74
PSPC1-202ENST00000427943 A0A1W2PQ27 194 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 A0A1W2PQ64 194 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 A0A1W2PQD8 194 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 MAGEA11P43364 429 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 DLG4P78352 724 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 CSTF1Q05048 431 aaKnown RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 TNK2Q07912 1038 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 DPYDQ12882 1025 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 MAPRE1Q15691 268 aaKnown RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 CEP135Q66GS9 1140 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 SCARA5Q6ZMJ2 495 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 KRBA2Q6ZNG9 492 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 SLC9A9Q8IVB4 645 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 RIN3Q8TB24 985 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 USP13Q92995 863 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 SYAP1Q96A49 352 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 TRMT2BQ96GJ1 504 aaKnown RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 PCED1BQ96HM7 432 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 XYLT2Q9H1B5 865 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 DPEP3Q9H4B8 488 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 SMYD3Q9H7B4 428 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 TRPC7Q9HCX4 862 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 UXTQ9UBK9 157 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 MYO16Q9Y6X6 1858 aa19.66■□□□□ 0.74
PSPC1-202ENST00000427943 RIF1Q5UIP0 2472 aaKnown RBP19.66■□□□□ 0.74
PSPC1-202ENST00000427943 PDXKO00764 312 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 TACC1O75410 805 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 STAU1O95793 577 aaKnown RBP19.65■□□□□ 0.74
PSPC1-202ENST00000427943 DDX6P26196 483 aaKnown RBP eCLIP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms