RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CFAP221Q4G0U5 840 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 MDH1BQ5I0G3 518 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 FAM171BQ6P995 826 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 TPRG1Q6ZUI0 275 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 INTS8Q75QN2 995 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 FAM186BQ8IYM0 893 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 DTWD2Q8NBA8 298 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 DNASE1L2Q92874 299 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 GSDMAQ96QA5 445 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 TSG101Q99816 390 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 GTPBP4Q9BZE4 634 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 ZMYM5Q9UJ78 669 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 MRPS17Q9Y2R5 130 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 SLC38A8A6NNN8 435 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 IKBKBO14920 756 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 NCAM2O15394 837 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 KINO60870 393 aaKnown RBP22.06■■□□□ 1.12
HSPG2-205ENST00000427897 TRIM21P19474 475 aaKnown RBP22.06■■□□□ 1.12
HSPG2-205ENST00000427897 BDNFP23560 247 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 AVPR1AP37288 418 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 PIK3CAP42336 1068 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 CLDN10P78369 228 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 ZNF852Q6ZMS4 543 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 LIMS2Q7Z4I7 341 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 CCDC105Q8IYK2 499 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 CCDC150Q8NCX0 1101 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 MYCBPAPQ8TBZ2 947 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 MYLPFQ96A32 169 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 NELL2Q99435 816 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 PKMYT1Q99640 499 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 IMPG2Q9BZV3 1241 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 FOXQ1Q9C009 403 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 MMRN2Q9H8L6 949 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 HEBP1Q9NRV9 189 aa22.06■■□□□ 1.12
HSPG2-205ENST00000427897 THG1LQ9NWX6 298 aaKnown RBP22.06■■□□□ 1.12
HSPG2-205ENST00000427897 FAM170BA6NMN3 283 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 CETN3O15182 167 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 MAPK13O15264 365 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 PTPN1P18031 435 aaKnown RBP22.05■■□□□ 1.12
HSPG2-205ENST00000427897 DDX6P26196 483 aaKnown RBP eCLIP22.05■■□□□ 1.12
HSPG2-205ENST00000427897 MAGEA11P43364 429 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 NLRP12P59046 1061 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 NFIL3Q16649 462 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 ZNF658Q5TYW1 1059 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-205ENST00000427897 VSTM1Q6UX27 236 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 SCARA5Q6ZMJ2 495 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 SMYD4Q8IYR2 804 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-205ENST00000427897 MAB21L3Q8N8X9 362 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 STKLD1Q8NE28 680 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 PJA1Q8NG27 643 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 TIGD1Q96MW7 591 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 BCO2Q9BYV7 579 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 GZF1Q9H116 711 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-205ENST00000427897 EHD2Q9NZN4 543 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 CHMP5Q9NZZ3 219 aa22.05■■□□□ 1.12
HSPG2-205ENST00000427897 MAN2B1O00754 1011 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 TRIM66O15016 1216 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 HMGA1P17096 107 aaKnown RBP22.04■■□□□ 1.12
HSPG2-205ENST00000427897 CD72P21854 359 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 KPNA1P52294 538 aaPredicted RBP22.04■■□□□ 1.12
HSPG2-205ENST00000427897 STIM1Q13586 685 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 CCDC142Q17RM4 750 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 ZACNQ401N2 412 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 SV2AQ7L0J3 742 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 ALYREFQ86V81 257 aaKnown RBP22.04■■□□□ 1.12
HSPG2-205ENST00000427897 ENGASEQ8NFI3 743 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 TAF4BQ92750 862 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 PCED1BQ96HM7 432 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 TNIP3Q96KP6 325 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 MED10Q9BTT4 135 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 XYLT2Q9H1B5 865 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 IL21Q9HBE4 155 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 CRTAC1Q9NQ79 661 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 FAM86C1Q9NVL1 165 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 ATP8B3O60423 1300 aa22.04■■□□□ 1.12
HSPG2-205ENST00000427897 ZNF318Q5VUA4 2279 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 AKAP3O75969 853 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 F11P03951 625 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 EPB41P11171 864 aaKnown RBP22.03■■□□□ 1.12
HSPG2-205ENST00000427897 CDH8P55286 799 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 EDRF1Q3B7T1 1238 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 ARHGAP29Q52LW3 1261 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 CMTM8Q8IZV2 173 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 CELF5Q8N6W0 485 aaKnown RBP22.03■■□□□ 1.12
HSPG2-205ENST00000427897 B3GALNT2Q8NCR0 500 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 BPIFB1Q8TDL5 484 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 SLC46A2Q9BY10 475 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 DNAI2Q9GZS0 605 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 SMYD3Q9H7B4 428 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 VRTNQ9H8Y1 702 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 TRPC7Q9HCX4 862 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 OBP2AQ9NY56 170 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 PCDHA5Q9Y5H7 936 aa22.03■■□□□ 1.12
HSPG2-205ENST00000427897 CHADO15335 359 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 STX10O60499 249 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 NOL4O94818 638 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 VNN1O95497 513 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 PRCPP42785 496 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 RAP1GAPP47736 663 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 GCLMP48507 274 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms