RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 HVCN1Q96D96 273 aa18.22■□□□□ 0.51
PSMD4-203ENST00000427779 ACBD6Q9BR61 282 aa18.22■□□□□ 0.51
PSMD4-203ENST00000427779 TRPC7Q9HCX4 862 aa18.22■□□□□ 0.51
PSMD4-203ENST00000427779 HELZP42694 1942 aaKnown RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 THADAQ6YHU6 1953 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TRAV19A0A0A6YYK7 116 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 BCLAF3A2AJT9 711 aaKnown RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 NOL4O94818 638 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 BMP15O95972 392 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 CKMP06732 381 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 PLCG1P19174 1290 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 GBP1P32455 592 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 GPR15P49685 360 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 NOVA1P51513 510 aaKnown RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 MYL7Q01449 175 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 ZNF77Q15935 545 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 ZC2HC1CQ53FD0 456 aaPredicted RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 DAB2IPQ5VWQ8 1189 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TCEAL6Q6IPX3 200 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TMEM86AQ8N2M4 240 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 FSIP1Q8NA03 581 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TCEAL3Q969E4 200 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 MYRFLQ96LU7 910 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TMLHEQ9NVH6 421 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 POLR3BQ9NW08 1133 aaPredicted RBP18.21■□□□□ 0.51
PSMD4-203ENST00000427779 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 CACNA1GO43497 2377 aa18.21■□□□□ 0.51
PSMD4-203ENST00000427779 TISP43B9A030 160 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 HUS1O60921 280 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 TADA3O75528 432 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 PROS1P07225 676 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 LONP1P36776 959 aaKnown RBP18.2■□□□□ 0.5
PSMD4-203ENST00000427779 DGKEP52429 567 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 USP4Q13107 963 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 DDR2Q16832 855 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 INTS6LQ5JSJ4 861 aaKnown RBP18.2■□□□□ 0.5
PSMD4-203ENST00000427779 SDHAF4Q5VUM1 108 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 CRELD2Q6UXH1 353 aaPredicted RBP18.2■□□□□ 0.5
PSMD4-203ENST00000427779 PDCL2Q8N4E4 241 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 STKLD1Q8NE28 680 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 TTC16Q8NEE8 873 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 TSTD1Q8NFU3 115 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 LRRC15Q8TF66 581 aa18.2■□□□□ 0.5
PSMD4-203ENST00000427779 DDX43Q9NXZ2 648 aaKnown RBP18.2■□□□□ 0.5
PSMD4-203ENST00000427779 LAMA1P25391 3075 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 ABCA7Q8IZY2 2146 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 DCLK1O15075 740 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 CYP2F1P24903 491 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 POLR2BP30876 1174 aaKnown RBP18.19■□□□□ 0.5
PSMD4-203ENST00000427779 TFAMQ00059 246 aaKnown RBP18.19■□□□□ 0.5
PSMD4-203ENST00000427779 EML3Q32P44 896 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 USP39Q53GS9 565 aaKnown RBP18.19■□□□□ 0.5
PSMD4-203ENST00000427779 NAIF1Q69YI7 327 aaPredicted RBP18.19■□□□□ 0.5
PSMD4-203ENST00000427779 SPATA18Q8TC71 538 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
PSMD4-203ENST00000427779 KIF2CQ99661 725 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 L1RE1Q9UN81 338 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 EXOC7Q9UPT5 735 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
PSMD4-203ENST00000427779 C4orf47A7E2U8 309 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 NFATC1O95644 943 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 ITGB3P05106 788 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 PDE6CP51160 858 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 KCNB1Q14721 858 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 PMS2CLQ68D20 193 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 ZNF720Q7Z2F6 126 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 SPATA2LQ8IUW3 424 aaPredicted RBP18.18■□□□□ 0.5
PSMD4-203ENST00000427779 LRRC52Q8N7C0 313 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 EZH1Q92800 747 aaPredicted RBP18.18■□□□□ 0.5
PSMD4-203ENST00000427779 FUBP3Q96I24 572 aaKnown RBP eCLIP18.18■□□□□ 0.5
PSMD4-203ENST00000427779 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
PSMD4-203ENST00000427779 LNP1A1A4G5 178 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
PSMD4-203ENST00000427779 KHNYNO15037 678 aaKnown RBP18.17■□□□□ 0.5
PSMD4-203ENST00000427779 LDHAP00338 332 aaKnown RBP18.17■□□□□ 0.5
PSMD4-203ENST00000427779 TCF3P15923 654 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 ACAT1P24752 427 aaKnown RBP18.17■□□□□ 0.5
PSMD4-203ENST00000427779 GJB2P29033 226 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 PCSK1P29120 753 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 ADSSP30520 456 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 DDIT3P35638 169 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 LHX1P48742 406 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 ZNF252P-AS1Q0IIN9 211 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 UNQ6494/PRO21346Q6UXR6 183 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 SFR1Q86XK3 245 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 BRSK2Q8IWQ3 736 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 CYP2S1Q96SQ9 504 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 TMEM9BQ9NQ34 198 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 SEL1LQ9UBV2 794 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 ITGA11Q9UKX5 1188 aa18.17■□□□□ 0.5
PSMD4-203ENST00000427779 FRYQ5TBA9 3013 aa18.16■□□□□ 0.5
PSMD4-203ENST00000427779 C4orf50Q6ZRC1 276 aa18.16■□□□□ 0.5
PSMD4-203ENST00000427779 CYP2U1Q7Z449 544 aa18.16■□□□□ 0.5
PSMD4-203ENST00000427779 SCN4BQ8IWT1 228 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms