RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CTCFP49711 727 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 RPS6P62753 249 aaKnown RBP18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 AASDHQ4L235 1098 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 ARHGAP15Q53QZ3 475 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 DENND5BQ6ZUT9 1274 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 LINC00523Q86TU6 105 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 OLFML3Q9NRN5 406 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 WWOXQ9NZC7 414 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 M0QYT0 321 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 MTSS1O43312 755 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 PMPCBO75439 489 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 EPHB2P29323 1055 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 ORC1Q13415 861 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 CDH18Q13634 790 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 CAPN10Q9HC96 672 aa18.67■□□□□ 0.58
ARHGEF28-203ENST00000426542 LOC100653049A0A140TA62 436 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 KRT34O76011 436 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 LRG1P02750 347 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CETPP11597 493 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 KLRC1P26715 233 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CUL2Q13617 745 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 HIST2H2ACQ16777 129 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 GNASQ5JWF2 1037 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 DAB2IPQ5VWQ8 1189 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 HIST2H2AA3Q6FI13 130 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 EXOSC4Q9NPD3 245 aaKnown RBP18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 EVPLLA8MZ36 301 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CPA2P48052 419 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 FAXCQ5TGI0 409 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 BBS7Q8IWZ6 715 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 SGF29Q96ES7 293 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 SHCBP1LQ9BZQ2 653 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 THAP2Q9H0W7 228 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 SPON1Q9HCB6 807 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 TMEM154Q6P9G4 183 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CACNA2D2Q9NY47 1150 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 LSP1P33241 339 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 GLRA4Q5JXX5 417 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 EFL1Q7Z2Z2 1120 aaKnown RBP18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 SCN3BQ9NY72 215 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 PRG3Q9Y2Y8 225 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 SOAT2O75908 522 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CSF1RP07333 972 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CCDC142Q17RM4 750 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 VPS37AQ8NEZ2 397 aa18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 DIS3LQ8TF46 1054 aaKnown RBP18.66■□□□□ 0.58
ARHGEF28-203ENST00000426542 CDC42BPBQ9Y5S2 1711 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 ANXA9O76027 345 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 NUDT12Q9BQG2 462 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 FUT11Q495W5 492 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 UGT3A1Q6NUS8 523 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 BLOC1S5Q8TDH9 187 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 PRPF18Q99633 342 aaKnown RBP18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 TRMT6Q9UJA5 497 aaKnown RBP18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 VWA5AO00534 786 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 MLNP12872 115 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 SLC29A2Q14542 456 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 NSL1Q96IY1 281 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 RBBP8Q99708 897 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 RUSC1Q9BVN2 902 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 PPP1R3GB7ZBB8 358 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 DDHD2O94830 711 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 FDFT1P37268 417 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 FAM83EQ2M2I3 478 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 MRGBPQ9NV56 204 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 TRPC5OSA6NMA1 111 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 RUNX1T1Q06455 604 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 ZNF177Q13360 481 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 TP53BP2Q13625 1128 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 MAPRE1Q15691 268 aaKnown RBP18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 IYDQ6PHW0 289 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 ANKS1AQ92625 1134 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 CNDP1Q96KN2 507 aa18.65■□□□□ 0.58
ARHGEF28-203ENST00000426542 TRIM49D1C9J1S8 452 aa18.64■□□□□ 0.58
ARHGEF28-203ENST00000426542 STX7O15400 261 aaKnown RBP18.64■□□□□ 0.58
ARHGEF28-203ENST00000426542 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.58
ARHGEF28-203ENST00000426542 AGPAT3Q9NRZ7 376 aa18.64■□□□□ 0.58
ARHGEF28-203ENST00000426542 DDIT4Q9NX09 232 aa18.64■□□□□ 0.58
ARHGEF28-203ENST00000426542 SGPL1O95470 568 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 KCTD10Q9H3F6 313 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 XPO1O14980 1071 aaKnown RBP18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 TGM2P21980 687 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 ECSITQ9BQ95 431 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 USE1Q9NZ43 259 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 PNMA8BQ9ULN7 279 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 RSPH10B2B2RC85 870 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 MSH4O15457 936 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 SLC37A4O43826 429 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 SERPINI2O75830 405 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 RSPH10BP0C881 870 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 TBL3Q12788 808 aaKnown RBP18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 R3HDM1Q15032 1099 aaKnown RBP18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 CLEC16AQ2KHT3 1053 aa18.64■□□□□ 0.57
ARHGEF28-203ENST00000426542 XRRA1Q6P2D8 792 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms