RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 LDHAP00338 332 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 CSH1P0DML2 217 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 CSH2P0DML3 217 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 ARSAP15289 507 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 RBP5P82980 135 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TSPY1Q01534 308 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 SPEM2Q0P670 501 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 ALCAMQ13740 583 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TAF12Q16514 161 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 NAIF1Q69YI7 327 aaPredicted RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 HEATR6Q6AI08 1181 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 LAIR1Q6GTX8 287 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 FSTL4Q6MZW2 842 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 MON1AQ86VX9 555 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 LONP2Q86WA8 852 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 CBWD2Q8IUF1 395 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TMEM86AQ8N2M4 240 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 GPD1LQ8N335 351 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TOP6BLQ8N6T0 577 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 CACTINQ8WUQ7 758 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 SECISBP2LQ93073 1101 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 MYRFLQ96LU7 910 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 SLC22A12Q96S37 553 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TMEM206Q9H813 350 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 FBRSL1Q9HCM7 1045 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 TDP1Q9NUW8 608 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 INTS13Q9NVM9 706 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 KBTBD4Q9NVX7 518 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 THG1LQ9NWX6 298 aaKnown RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 GMEB2Q9UKD1 530 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 USP18Q9UMW8 372 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 MAGED2Q9UNF1 606 aaPredicted RBP10.79□□□□□ -0.68
GACAT3-201ENST00000426539 SNX9Q9Y5X1 595 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 NUP210Q8TEM1 1887 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 STX6O43752 255 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 ATP2C2O75185 946 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 RETP07949 1114 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 KRT19P08727 400 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 LMO2P25791 158 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 DDX6P26196 483 aaKnown RBP eCLIP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 HOXA6P31267 233 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 AVPR1AP37288 418 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 LMNB2Q03252 620 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 RUNX3Q13761 415 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 SIM2Q14190 667 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 ZNF268Q14587 947 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 CFAP221Q4G0U5 840 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 PRR23BQ6ZRT6 265 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 EPM2AIP1Q7L775 607 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 ADGRF2Q8IZF7 708 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 NOC3LQ8WTT2 800 aaKnown RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 TRMT2BQ96GJ1 504 aaKnown RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 CYP2S1Q96SQ9 504 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 ZSCAN16Q9H4T2 348 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 CRTAC1Q9NQ79 661 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 TFIP11Q9UBB9 837 aaKnown RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 ZMYM5Q9UJ78 669 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.78□□□□□ -0.68
GACAT3-201ENST00000426539 DNAH14Q0VDD8 3507 aa10.78□□□□□ -0.68
GACAT3-201ENST00000426539 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 SOBPA7XYQ1 873 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 PRR5-ARHGAP8B1AHC4 643 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 TRDMT1O14717 391 aaKnown RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 EGFP01133 1207 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 TMEM191BP0C7N4 346 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 LHX1P48742 406 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 PSMC1P62191 440 aaKnown RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 ARHGAP8P85298 464 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 MYL7Q01449 175 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 ZNF77Q15935 545 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 SHC4Q6S5L8 630 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 WDR5BQ86VZ2 330 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 CCDC65Q8IXS2 484 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 MRPS31Q92665 395 aaKnown RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 EZH1Q92800 747 aaPredicted RBP10.77□□□□□ -0.69
GACAT3-201ENST00000426539 HPDLQ96IR7 371 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 TNMDQ9H2S6 317 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 GCNT4Q9P109 453 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 RAB23Q9ULC3 237 aa10.77□□□□□ -0.69
GACAT3-201ENST00000426539 FRYLO94915 3013 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 DCDC2BA2VCK2 349 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 C2orf78A6NCI8 922 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms