RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RNF208Q9H0X6 261 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
ACTB-204ENST00000425660 KRIT1O00522 736 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 HCRTO43612 131 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 RPL34P49207 117 aaKnown RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 OGDHQ02218 1023 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 ZNF211Q13398 564 aaPredicted RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 TUSC3Q13454 348 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 GPNMBQ14956 572 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 C8orf74Q6P047 294 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 ANKRD52Q8NB46 1076 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 SENP8Q96LD8 212 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 UROC1Q96N76 676 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 SLC4A5Q9BY07 1137 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 CACNG4Q9UBN1 327 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 HESX1Q9UBX0 185 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 PDGFRBP09619 1106 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 COL6A1P12109 1028 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 RFC1P35251 1148 aaPredicted RBP16.04■□□□□ 0.16
ACTB-204ENST00000425660 LONRF2Q1L5Z9 754 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 SEL1L2Q5TEA6 688 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 LRRC38Q5VT99 294 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 WSCD1Q658N2 575 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
ACTB-204ENST00000425660 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 PAAF1Q9BRP4 392 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 AP1M1Q9BXS5 423 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 STIM2Q9P246 746 aa16.04■□□□□ 0.16
ACTB-204ENST00000425660 DMGDHQ9UI17 866 aaKnown RBP16.04■□□□□ 0.16
ACTB-204ENST00000425660 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 E5RJQ4 531 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 NBNO60934 754 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.161e-16■■■□□ 16.1
ACTB-204ENST00000425660 POMCP01189 267 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 LHX1P48742 406 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 BCAT1P54687 386 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 PPP2R5EQ16537 467 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 PMF1Q6P1K2 205 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 ANKRD33Q7Z3H0 272 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 KATNAL2Q8IYT4 538 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 KRT12Q99456 494 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 CYLDQ9NQC7 956 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
ACTB-204ENST00000425660 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
ACTB-204ENST00000425660 TAS2R40P59535 323 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 PDE4CQ08493 712 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 BST2Q10589 180 aaKnown RBP16.03■□□□□ 0.16
ACTB-204ENST00000425660 AADACL2Q6P093 401 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 CD300LGQ6UXG3 332 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 SLC13A5Q86YT5 568 aaPredicted RBP16.03■□□□□ 0.16
ACTB-204ENST00000425660 ZDHHC17Q8IUH5 632 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 HNRNPABQ99729 332 aaKnown RBP16.03■□□□□ 0.16
ACTB-204ENST00000425660 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 ST7Q9NRC1 585 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
ACTB-204ENST00000425660 F8VP50 259 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 GOLGA8SH3BPF8 625 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 TULP2O00295 520 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 ERLIN1O75477 346 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 CYP11A1P05108 521 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 CCDC130P13994 396 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 SNX16P57768 344 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 ACAP1Q15027 740 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 TIGD5Q53EQ6 642 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 DAB2IPQ5VWQ8 1189 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 GLB1LQ6UWU2 654 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 JOSD2Q8TAC2 188 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 LPIN3Q9BQK8 851 aa16.02■□□□□ 0.16
ACTB-204ENST00000425660 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.16
ACTB-204ENST00000425660 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.16
ACTB-204ENST00000425660 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 M0QZQ0 153 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 FSCN2O14926 492 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 B3GAT3O94766 335 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 PTPN1P18031 435 aaKnown RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DSC1Q08554 894 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 CLLU1OSQ5K130 101 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 BEND6Q5SZJ8 279 aaPredicted RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 OLFML1Q6UWY5 402 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 FUKQ8N0W3 1084 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms