RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ARHGAP25P42331 645 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CLCN2P51788 898 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 ITKQ08881 620 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 ZNF260Q3ZCT1 412 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CRELD2Q6UXH1 353 aaPredicted RBP6.16□□□□□ -1.42
LINC01040-201ENST00000425048 TRIM72Q6ZMU5 477 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 RP9Q8TA86 221 aaKnown RBP6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CYP2W1Q8TAV3 490 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 SLC46A1Q96NT5 459 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CAMKK2Q96RR4 588 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 FSD1LQ9BXM9 530 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.16□□□□□ -1.42
LINC01040-201ENST00000425048 ABCF2Q9UG63 623 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 SERTAD3Q9UJW9 196 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 FZD9O00144 591 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 FESP07332 822 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 ZNF134P52741 427 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 HK3P52790 923 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 HEATR3Q7Z4Q2 680 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 MIER2Q8N344 545 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 PTDSS2Q9BVG9 487 aa6.15□□□□□ -1.42
LINC01040-201ENST00000425048 WDR17Q8IZU2 1322 aa6.15□□□□□ -1.43
LINC01040-201ENST00000425048 GABRDO14764 452 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 ATXN1LP0C7T5 689 aaKnown RBP6.14□□□□□ -1.43
LINC01040-201ENST00000425048 CCKBRP32239 447 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 SP2Q02086 613 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 NOGQ13253 232 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 LONRF3Q496Y0 759 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 AMOTQ4VCS5 1084 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 KLHL22Q53GT1 634 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 DAZAP1Q96EP5 407 aaKnown RBP6.14□□□□□ -1.43
LINC01040-201ENST00000425048 MACROD1Q9BQ69 325 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 TTYH3Q9C0H2 523 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 CCDC8Q9H0W5 538 aaPredicted RBP6.14□□□□□ -1.43
LINC01040-201ENST00000425048 GLOD4Q9HC38 313 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 PDGFCQ9NRA1 345 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 USP35Q9P2H5 1018 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 FEZ2Q9UHY8 353 aaPredicted RBP6.14□□□□□ -1.43
LINC01040-201ENST00000425048 CCNL1Q9UK58 526 aaPredicted RBP6.14□□□□□ -1.43
LINC01040-201ENST00000425048 SSX2IPQ9Y2D8 614 aa6.14□□□□□ -1.43
LINC01040-201ENST00000425048 MYMKA6NI61 221 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 H3BNC9 293 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 PIM1P11309 404 aaPredicted RBP6.13□□□□□ -1.43
LINC01040-201ENST00000425048 PXNP49023 591 aaPredicted RBP6.13□□□□□ -1.43
LINC01040-201ENST00000425048 GUCY2FP51841 1108 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 LOXL3P58215 753 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 MTMR1Q13613 665 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 IQCB1Q15051 598 aa6.13□□□□□ -1.43
LINC01040-201ENST00000425048 A1L4Q6 167 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 POC1B-GALNT4F8VUJ3 575 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 H7C1Q1 480 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 DCLK1O15075 740 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 BCAR3O75815 825 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 PDCP20941 246 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 PPIFP30405 207 aaKnown RBP6.12□□□□□ -1.43
LINC01040-201ENST00000425048 RAPGEF1Q13905 1077 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 E2F2Q14209 437 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 ODF1Q14990 250 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 CERKLQ49MI3 558 aaPredicted RBP6.12□□□□□ -1.43
LINC01040-201ENST00000425048 ARHGAP40Q5TG30 622 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 PPP1R3BQ86XI6 285 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 SAMD14Q8IZD0 417 aaPredicted RBP6.12□□□□□ -1.43
LINC01040-201ENST00000425048 GALNT4Q8N4A0 578 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 NANOGP1Q8N7R0 232 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 ABHD11Q8NFV4 315 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 ATG4AQ8WYN0 398 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 GLG1Q92896 1179 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 RITA1Q96K30 269 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 FAM167AQ96KS9 214 aa6.12□□□□□ -1.43
LINC01040-201ENST00000425048 AHSGP02765 367 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 CCND1P24385 295 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 GPSM2P81274 684 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 RUSC1-AS1Q66K80 236 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 MTHFD1LQ6UB35 978 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 Q6ZWC4 215 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 MRPL10Q7Z7H8 261 aaKnown RBP6.11□□□□□ -1.43
LINC01040-201ENST00000425048 XAGE5Q8WWM1 108 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 MOGAT1Q96PD6 335 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 ADGRE3Q9BY15 652 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 SLC13A1Q9BZW2 595 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 SPC25Q9HBM1 224 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 LMBRD1Q9NUN5 540 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 AFG3L2Q9Y4W6 797 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 PCDHA1Q9Y5I3 950 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 CACNA1IQ9P0X4 2223 aa6.11□□□□□ -1.43
LINC01040-201ENST00000425048 SOCS2O14508 198 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 TJP3O95049 919 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 FTLP02792 175 aaPredicted RBP6.1□□□□□ -1.43
LINC01040-201ENST00000425048 DLDP09622 509 aaKnown RBP6.1□□□□□ -1.43
LINC01040-201ENST00000425048 TYRP14679 529 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 LILRA4P59901 499 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 PTPN21Q16825 1174 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 Q4G0T1 1027 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 EGFLAMQ63HQ2 1017 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 FCRL6Q6DN72 434 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 ZDHHC17Q8IUH5 632 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 PIGOQ8TEQ8 1089 aa6.1□□□□□ -1.43
LINC01040-201ENST00000425048 R3HDM4Q96D70 268 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms