RNA–Protein interactions for RNA: ENST00000423546.1

FAM225B-201, Transcript of family with sequence similarity 225 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM225B, Length 5,629 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM225B-201ENST00000423546 KRT72Q14CN4 511 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SLC47A2Q86VL8 602 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SNX9Q9Y5X1 595 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 HMOX2P30519 316 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 RAP1GDS1P52306 607 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ACTN3Q08043 901 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 RARS2Q5T160 578 aaKnown RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 C1orf186Q6ZWK4 172 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SGSM3Q96HU1 749 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 YIPF3Q9GZM5 350 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ZNF446Q9NWS9 450 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TRIM66O15016 1216 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 EFHBQ8N7U6 833 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 GTF3C2Q8WUA4 911 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 FAM118BQ9BPY3 351 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TRPC7Q9HCX4 862 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SLIT2O94813 1529 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SMAPO00193 183 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ANGPT2O15123 496 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 OGTO15294 1046 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 TLR2O60603 784 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 EFCAB14O75071 495 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 HIST1H2AGP0C0S8 130 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 HIST1H2ADP20671 130 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 RGS7P49802 495 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SEC24CP53992 1094 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 RIBC1Q8N443 379 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 HIST1H2AHQ96KK5 128 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 HIST1H2AJQ99878 128 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 H2AFJQ9BTM1 129 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 ZC4H2Q9NQZ6 224 aa12.91□□□□□ -0.34
FAM225B-201ENST00000423546 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
FAM225B-201ENST00000423546 RARBP10826 455 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 RABGAP1LQ5R372 815 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 RFWD2Q8NHY2 731 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ARHGAP26Q9UNA1 814 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PSMD10O75832 226 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 CASP5P51878 434 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 DDX53Q86TM3 631 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PCDHGC5Q9Y5F6 944 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 APRTP07741 180 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 MAP4P27816 1152 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PTENP60484 403 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 CLEC16AQ2KHT3 1053 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SERPINB12Q96P63 405 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ARHGAP10A1A4S6 786 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 EIF4E1BA6NMX2 242 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SERPIND1P05546 499 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 HNRNPH3P31942 346 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PGM1P36871 562 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PRKCIP41743 596 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 KDSRQ06136 332 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 HIC1Q14526 733 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 SPDYE7PQ495Y7 208 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 OSBPL1AQ9BXW6 950 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 WHRNQ9P202 907 aa12.9□□□□□ -0.34
FAM225B-201ENST00000423546 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 USP15Q9Y4E8 981 aaPredicted RBP12.9□□□□□ -0.34
FAM225B-201ENST00000423546 TMEM120BA0PK00 339 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 MAP2K7O14733 419 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 TRADDQ15628 312 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 SYTL3Q4VX76 610 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 HYIQ5T013 277 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 USP33Q8TEY7 942 aa12.9□□□□□ -0.35
FAM225B-201ENST00000423546 HDAC7Q8WUI4 952 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms