RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 NLRP12P59046 1061 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 NFIL3Q16649 462 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 MFSD6LQ8IWD5 586 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 ZNF687Q8N1G0 1237 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 RIN3Q8TB24 985 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 ERCC4Q92889 916 aaPredicted RBP16.55■□□□□ 0.24
SPC24-201ENST00000423327 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 FUBP3Q96I24 572 aaKnown RBP eCLIP16.55■□□□□ 0.24
SPC24-201ENST00000423327 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
SPC24-201ENST00000423327 SLC46A2Q9BY10 475 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 SMG9Q9H0W8 520 aaKnown RBP16.55■□□□□ 0.24
SPC24-201ENST00000423327 SDCBP2Q9H190 292 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 SMYD3Q9H7B4 428 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 BRD9Q9H8M2 597 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 LTB4R2Q9NPC1 389 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 SIT1Q9Y3P8 196 aa16.55■□□□□ 0.24
SPC24-201ENST00000423327 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
SPC24-201ENST00000423327 SLC38A8A6NNN8 435 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 FGF19O95750 216 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 RFX1P22670 979 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 NR2F2P24468 414 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 TARSP26639 723 aaKnown RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 ATICP31939 592 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 MAGEA11P43364 429 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 RAP1GAPP47736 663 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 CACNA2D1P54289 1103 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 FZD5Q13467 585 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 BIRC3Q13489 604 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 ANGPT1Q15389 498 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 ZACNQ401N2 412 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 TMC2Q8TDI7 906 aa16.54■□□□□ 0.24
SPC24-201ENST00000423327 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 MAGED2Q9UNF1 606 aaPredicted RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 ZNF638Q14966 1978 aaKnown RBP16.54■□□□□ 0.24
SPC24-201ENST00000423327 TRIM49P0CI25 452 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 TRIM49CP0CI26 452 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 CSH1P0DML2 217 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 CSH2P0DML3 217 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 BDNFP23560 247 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 WEE1P30291 646 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 CDH8P55286 799 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 TNNC1P63316 161 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 TRPC3Q13507 836 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 NCOA4Q13772 614 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 ARHGAP15Q53QZ3 475 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 MDH1BQ5I0G3 518 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 SCARA5Q6ZMJ2 495 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 SV2AQ7L0J3 742 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 SPATA20Q8TB22 786 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 ATOH1Q92858 354 aaPredicted RBP16.53■□□□□ 0.24
SPC24-201ENST00000423327 SYAP1Q96A49 352 aaPredicted RBP16.53■□□□□ 0.24
SPC24-201ENST00000423327 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
SPC24-201ENST00000423327 SHDQ96IW2 340 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 TRPV5Q9NQA5 729 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 CCL26Q9Y258 94 aa16.53■□□□□ 0.24
SPC24-201ENST00000423327 FANCMQ8IYD8 2048 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 MAPK13O15264 365 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 PHACTR2O75167 634 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 FAM163BP0C2L3 166 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 GNL1P36915 607 aaPredicted RBP16.52■□□□□ 0.24
SPC24-201ENST00000423327 AP3M2P53677 418 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 USP46P62068 366 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 RPL10AP62906 217 aaKnown RBP16.52■□□□□ 0.24
SPC24-201ENST00000423327 FAM160A1Q05DH4 1040 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 PPP3CAQ08209 521 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 WDR44Q5JSH3 913 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 TXNDC8Q6A555 127 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 SPOPLQ6IQ16 392 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 MAML2Q8IZL2 1156 aaPredicted RBP16.52■□□□□ 0.24
SPC24-201ENST00000423327 CMTM8Q8IZV2 173 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 MYCBPAPQ8TBZ2 947 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 IRF7Q92985 503 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 CCDC47Q96A33 483 aaKnown RBP16.52■□□□□ 0.24
SPC24-201ENST00000423327 ZFYVE19Q96K21 471 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 GCNAQ96QF7 691 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 SNX25Q9H3E2 840 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 OBP2AQ9NY56 170 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 MAGEC2Q9UBF1 373 aaPredicted RBP16.52■□□□□ 0.24
SPC24-201ENST00000423327 HMGXB4Q9UGU5 601 aa16.52■□□□□ 0.24
SPC24-201ENST00000423327 HELZP42694 1942 aaKnown RBP16.51■□□□□ 0.23
SPC24-201ENST00000423327 FAM170BA6NMN3 283 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 CLDN5O00501 218 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 ZNF263O14978 683 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 CHADO15335 359 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 KIF20AO95235 890 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 PTPN1P18031 435 aaKnown RBP16.51■□□□□ 0.23
SPC24-201ENST00000423327 NBL1P41271 181 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 ASPAP45381 313 aa16.51■□□□□ 0.23
SPC24-201ENST00000423327 SOX9P48436 509 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms