RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MAGEC2Q9UBF1 373 aaPredicted RBP28.18■■■□□ 2.1
CDK9-202ENST00000421939 FBXL21Q9UKT6 434 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 CTNND2Q9UQB3 1225 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 FCARP24071 287 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 NOP14P78316 857 aaKnown RBP28.17■■■□□ 2.1
CDK9-202ENST00000421939 CYP27A1Q02318 531 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 DDR2Q16832 855 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 DCAF17Q5H9S7 520 aaPredicted RBP28.17■■■□□ 2.1
CDK9-202ENST00000421939 SDHAF4Q5VUM1 108 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 TTI2Q6NXR4 508 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 FOXR2Q6PJQ5 311 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 SUGP1Q8IWZ8 645 aaKnown RBP28.17■■■□□ 2.1
CDK9-202ENST00000421939 FBXL6Q8N531 539 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 B3GALNT2Q8NCR0 500 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 SMARCD2Q92925 531 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 IPO9Q96P70 1041 aaKnown RBP28.17■■■□□ 2.1
CDK9-202ENST00000421939 GCNAQ96QF7 691 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 ATXN3LQ9H3M9 355 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 IL21Q9HBE4 155 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.17■■■□□ 2.11e-32■■■■■ 782.6
CDK9-202ENST00000421939 SLC2A4RGQ9NR83 387 aa28.17■■■□□ 2.1
CDK9-202ENST00000421939 BICDL2A1A5D9 508 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 PDGFBP01127 241 aaPredicted RBP28.16■■■□□ 2.1
CDK9-202ENST00000421939 CFHP08603 1231 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 CSH1P0DML2 217 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 CSH2P0DML3 217 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 HMGA1P17096 107 aaKnown RBP28.16■■■□□ 2.1
CDK9-202ENST00000421939 PTPN1P18031 435 aaKnown RBP28.16■■■□□ 2.1
CDK9-202ENST00000421939 CDC25CP30307 473 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 ASPAP45381 313 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 TCERG1LQ5VWI1 586 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 TANGO2Q6ICL3 276 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 VSTM1Q6UX27 236 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 SCN4BQ8IWT1 228 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 STKLD1Q8NE28 680 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 ZSCAN18Q8TBC5 510 aaPredicted RBP28.16■■■□□ 2.1
CDK9-202ENST00000421939 ELSPBP1Q96BH3 223 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 CEP63Q96MT8 703 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 ARMCX3Q9UH62 379 aaPredicted RBP28.16■■■□□ 2.1
CDK9-202ENST00000421939 PTPRDP23468 1912 aa28.16■■■□□ 2.1
CDK9-202ENST00000421939 BDNFP23560 247 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 ARHGAP15Q53QZ3 475 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 STXBP5Q5T5C0 1151 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 CCDC150Q8NCX0 1101 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 DUSP9Q99956 384 aaKnown RBP28.15■■■□□ 2.1
CDK9-202ENST00000421939 CLSTN2Q9H4D0 955 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 APOBEC3GQ9HC16 384 aaKnown RBP28.15■■■□□ 2.1
CDK9-202ENST00000421939 ZFP14Q9HCL3 533 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 WNT16Q9UBV4 365 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 HCN4Q9Y3Q4 1203 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 ZNF318Q5VUA4 2279 aa28.15■■■□□ 2.1
CDK9-202ENST00000421939 NOL4O94818 638 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 PAK1Q13153 545 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 TNIP3Q96KP6 325 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 BCO2Q9BYV7 579 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 NIF3L1Q9GZT8 377 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 TRPV4Q9HBA0 871 aa28.14■■■□□ 2.1
CDK9-202ENST00000421939 MAGED2Q9UNF1 606 aaPredicted RBP28.14■■■□□ 2.1
CDK9-202ENST00000421939 SLC38A8A6NNN8 435 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 GPC5P78333 572 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 CYP4F8P98187 520 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 GPR158Q5T848 1215 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 SIX5Q8N196 739 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 FBXL13Q8NEE6 735 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 GBP4Q96PP9 640 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 PLA2G2FQ9BZM2 168 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 ELOVL4Q9GZR5 314 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 MFSD1Q9H3U5 465 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 METTL14Q9HCE5 456 aaKnown RBP28.13■■■□□ 2.09
CDK9-202ENST00000421939 RAPGEFL1Q9UHV5 662 aa28.13■■■□□ 2.09
CDK9-202ENST00000421939 GRIK1P39086 918 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 NLRP12P59046 1061 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 CBWD6Q4V339 395 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 CBWD3Q5JTY5 395 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 CBWD5Q5RIA9 395 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 FILIP1Q7Z7B0 1213 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 SEMA4DQ92854 862 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 TRMT2BQ96GJ1 504 aaKnown RBP28.12■■■□□ 2.09
CDK9-202ENST00000421939 ZNF518BQ9C0D4 1074 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 CYP3A43Q9HB55 503 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 UXTQ9UBK9 157 aaPredicted RBP28.12■■■□□ 2.09
CDK9-202ENST00000421939 HMGXB4Q9UGU5 601 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 CA14Q9ULX7 337 aa28.12■■■□□ 2.09
CDK9-202ENST00000421939 TRIM66O15016 1216 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 LRRN2O75325 713 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 ANXA13P27216 316 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 NDST1P52848 882 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 STX17P56962 302 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 CCDC40Q4G0X9 1142 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 FRMD5Q7Z6J6 570 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 TMEM150AQ86TG1 271 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 UNC93AQ86WB7 457 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 SLC35C1Q96A29 364 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 SPATA17Q96L03 361 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 MYRFLQ96LU7 910 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 CEP295NLQ96MC4 621 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 B3GNT5Q9BYG0 378 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 TASP1Q9H6P5 420 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 LMBRD1Q9NUN5 540 aa28.11■■■□□ 2.09
CDK9-202ENST00000421939 RAB20Q9NX57 234 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms