RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 PIGWQ7Z7B1 504 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 CPLX4Q7Z7G2 160 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 FNIP1Q8TF40 1166 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 STMN4Q9H169 189 aaPredicted RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 ASB7Q9H672 318 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 METTL5Q9NRN9 209 aaKnown RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.02■□□□□ 0.32
CTSB-203ENST00000420692 SCN1AP35498 2009 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 MAGEB2O15479 319 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 TSPAN1O60635 241 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 ITGAVP06756 1048 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 PECAM1P16284 738 aaPredicted RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 GCAP28676 217 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 GABRB2P47870 512 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 IFNAR2P48551 515 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 GPS1Q13098 491 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 RAB6CQ53S08 254 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 TRNP1Q6NT89 227 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 ARMC9Q7Z3E5 817 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 MCRS1Q96EZ8 462 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 HPDLQ96IR7 371 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 FAXDC2Q96IV6 333 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 RAB6CQ9H0N0 254 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 NAALADL1Q9UQQ1 740 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 TMEM120BA0PK00 339 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 KIAA0754O94854 1291 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 KDELR1P24390 212 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 CDR1P51861 262 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 RNF187Q5TA31 235 aaPredicted RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 RNASEH2BQ5TBB1 312 aaKnown RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 MS4A4AQ96JQ5 239 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 VTA1Q9NP79 307 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 KAT6AQ92794 2004 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 FSBPO95073 299 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 ATICP31939 592 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 GDF10P55107 478 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 DYNLT1P63172 113 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 GAD2Q05329 585 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 LRRC14Q15048 493 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 HP1BP3Q5SSJ5 553 aaPredicted RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 SH3PXD2AQ5TCZ1 1133 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 CYP4F22Q6NT55 531 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 TAOK1Q7L7X3 1001 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 CACNA2D3Q8IZS8 1091 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 ACTL9Q8TC94 416 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 CYP3A43Q9HB55 503 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 SAYSD1Q9NPB0 183 aa17.01■□□□□ 0.31
CTSB-203ENST00000420692 TPX2Q9ULW0 747 aaKnown RBP17.01■□□□□ 0.31
CTSB-203ENST00000420692 A0A1B0GUA9 196 aa17■□□□□ 0.31
CTSB-203ENST00000420692 H3BRB1 525 aa17■□□□□ 0.31
CTSB-203ENST00000420692 PDHXO00330 501 aa17■□□□□ 0.31
CTSB-203ENST00000420692 DNM1LO00429 736 aa17■□□□□ 0.31
CTSB-203ENST00000420692 PFKMP08237 780 aa17■□□□□ 0.31
CTSB-203ENST00000420692 MIPP30301 263 aa17■□□□□ 0.31
CTSB-203ENST00000420692 OTUD4Q01804 1114 aaKnown RBP17■□□□□ 0.31
CTSB-203ENST00000420692 SLC20A2Q08357 652 aa17■□□□□ 0.31
CTSB-203ENST00000420692 SF3A3Q12874 501 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■■■■ 28.4
CTSB-203ENST00000420692 TMEM132DQ14C87 1099 aa17■□□□□ 0.31
CTSB-203ENST00000420692 GKAP1Q5VSY0 366 aaPredicted RBP17■□□□□ 0.31
CTSB-203ENST00000420692 MAML1Q92585 1016 aa17■□□□□ 0.31
CTSB-203ENST00000420692 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
CTSB-203ENST00000420692 CABS1Q96KC9 395 aa17■□□□□ 0.31
CTSB-203ENST00000420692 PEBP4Q96S96 227 aa17■□□□□ 0.31
CTSB-203ENST00000420692 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
CTSB-203ENST00000420692 TBK1Q9UHD2 729 aa17■□□□□ 0.31
CTSB-203ENST00000420692 PCSK1NQ9UHG2 260 aa17■□□□□ 0.31
CTSB-203ENST00000420692 M0QYV0 167 aa17■□□□□ 0.31
CTSB-203ENST00000420692 CST8O60676 142 aa17■□□□□ 0.31
CTSB-203ENST00000420692 NDST1P52848 882 aa17■□□□□ 0.31
CTSB-203ENST00000420692 INCA1Q0VD86 236 aa17■□□□□ 0.31
CTSB-203ENST00000420692 BBS12Q6ZW61 710 aa17■□□□□ 0.31
CTSB-203ENST00000420692 CYP4V2Q6ZWL3 525 aaPredicted RBP17■□□□□ 0.31
CTSB-203ENST00000420692 CMASQ8NFW8 434 aaPredicted RBP17■□□□□ 0.31
CTSB-203ENST00000420692 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
CTSB-203ENST00000420692 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
CTSB-203ENST00000420692 SPON1Q9HCB6 807 aa17■□□□□ 0.31
CTSB-203ENST00000420692 DPP3Q9NY33 737 aa17■□□□□ 0.31
CTSB-203ENST00000420692 EFR3BQ9Y2G0 817 aa17■□□□□ 0.31
CTSB-203ENST00000420692 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CTSB-203ENST00000420692 COL1A2P08123 1366 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 PIK3R2O00459 728 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 ADCY6O43306 1168 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 ABHD2P08910 425 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 SMPD1P17405 629 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 C12orf29Q8N999 325 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 CCHCR1Q8TD31 782 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 MGARPQ8TDB4 240 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 NLRP7Q8WX94 980 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 PRCCQ92733 491 aaPredicted RBP16.99■□□□□ 0.31
CTSB-203ENST00000420692 PCDH9Q9HC56 1237 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms