RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SCNN1AP37088 669 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 BCAT1P54687 386 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 INTS6LQ5JSJ4 861 aaKnown RBP15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 KIAA0319Q5VV43 1072 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 NAA35Q5VZE5 725 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 PLEKHA7Q6IQ23 1121 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 FUT10Q6P4F1 479 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 OTOP2Q7RTS6 562 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 TMEM110Q86TL2 294 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZDHHC17Q8IUH5 632 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 GPIHBP1Q8IV16 184 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 FUKQ8N0W3 1084 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 C12orf29Q8N999 325 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 MSANTD4Q8NCY6 345 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 ATRIPQ8WXE1 791 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 IGSF21Q96ID5 467 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 RAD9AQ99638 391 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 SYT15Q9BQS2 421 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 PACSIN1Q9BY11 444 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 TTYH1Q9H313 450 aaPredicted RBP15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 DPEP3Q9H4B8 488 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 CSNK1G1Q9HCP0 422 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 PNPLA8Q9NP80 782 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 SEPT11Q9NVA2 429 aaKnown RBP15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 PUF60Q9UHX1 559 aaKnown RBP15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 SALL4Q9UJQ4 1053 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 UPP2O95045 317 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ABL1P00519 1130 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 PDGFRBP09619 1106 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 LINC00271P0C7V0 271 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 DNAJB2P25686 324 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 PPM1AP35813 382 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 PLA2G4AP47712 749 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 TAP1Q03518 808 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 BST2Q10589 180 aaKnown RBP15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 DENND1BQ6P3S1 775 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 KCNT2Q6UVM3 1135 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 PAQR9Q6ZVX9 377 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ANKS3Q6ZW76 656 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ARCQ7LC44 396 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLC39A11Q8N1S5 342 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 CPA5Q8WXQ8 436 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 KCTD13Q8WZ19 329 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 FUBP3Q96I24 572 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLC4A5Q9BY07 1137 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 DUSP16Q9BY84 665 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 GPR62Q9BZJ7 368 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZCWPW1Q9H0M4 648 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 CRTAC1Q9NQ79 661 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 ADAM22Q9P0K1 906 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 SCINQ9Y6U3 715 aa15.09■□□□□ 0.01
SHMT1P1-201ENST00000419974 F8W810 466 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 H7C4K7 107 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 XPO1O14980 1071 aaKnown RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 CALCAP01258 141 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 ACADSBP45954 432 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 SLC8A3P57103 927 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 BTG3Q14201 252 aaPredicted RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 NFE2Q16621 373 aaPredicted RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 CFAP221Q4G0U5 840 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 LIN9Q5TKA1 542 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 TTC30AQ86WT1 665 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 ERICH1Q86X53 443 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 SCML4Q8N228 414 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 LRRC57Q8N9N7 239 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 SLC35G2Q8TBE7 412 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 C2orf15Q8WU43 125 aaKnown RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 RABGGTAQ92696 567 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 CEP295NLQ96MC4 621 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 ALS2CR12Q96Q35 445 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 YME1L1Q96TA2 773 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 CDX2Q99626 313 aaPredicted RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 TTPALQ9BTX7 342 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 ABCB6Q9NP58 842 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 PARVAQ9NVD7 372 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 TRIM10Q9UDY6 481 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 PRG3Q9Y2Y8 225 aaPredicted RBP15.08■□□□□ 0
SHMT1P1-201ENST00000419974 SLC4A7Q9Y6M7 1214 aa15.08■□□□□ 0
SHMT1P1-201ENST00000419974 TSC2P49815 1807 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 M0QYV0 167 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 TNNT1P13805 278 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 NPR3P17342 541 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 IBSPP21815 317 aaPredicted RBP15.07■□□□□ 0
SHMT1P1-201ENST00000419974 TSPY1Q01534 308 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 PDCLQ13371 301 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 TUBB2AQ13885 445 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 GOLGA7BQ2TAP0 167 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 USP41Q3LFD5 358 aa15.07■□□□□ 0
SHMT1P1-201ENST00000419974 PAN2Q504Q3 1202 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms