RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ATP6V1G3Q96LB4 118 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 GPC1P35052 558 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 CTXN3Q4LDR2 81 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 BBS7Q8IWZ6 715 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 KCTD10Q9H3F6 313 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 MFSD1Q9H3U5 465 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 GID8Q9NWU2 228 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 PITPNM2Q9BZ72 1349 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 F8W810 466 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 AIM2O14862 343 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 SERPINI2O75830 405 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF286BP0CG31 522 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 MYL4P12829 197 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 KLRC2P26717 231 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 KCNK10P57789 538 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 FAM83EQ2M2I3 478 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 SBK1Q52WX2 424 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ALFQ53S48 1182 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 LVRNQ6Q4G3 990 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 SLC44A2Q8IWA5 706 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ANKRD49Q8WVL7 239 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 RIC8BQ9NVN3 520 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 GTF2A1LQ9UNN4 478 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 SPTLC1O15269 473 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 FAM71DQ8N9W8 422 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 TMEM245Q9H330 911 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 DBR1Q9UK59 544 aaKnown RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 MYMKA6NI61 221 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 DDX39BQ13838 428 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF284Q2VY69 593 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 TMC7Q7Z402 723 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ADGRF2Q8IZF7 708 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SPATA4Q8NEY3 305 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.65□□□□□ -0.543e-6■■■■■ 50.8
PTCH1-205ENST00000418258 ECSITQ9BQ95 431 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 PHF20Q9BVI0 1012 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 LNPEPQ9UIQ6 1025 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 NCF1BA6NI72 391 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 NCF1CA8MVU1 366 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SOAT2O75908 522 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SRP72O76094 671 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 NCF1P14598 390 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ACO1P21399 889 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 AASDHQ4L235 1098 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 IGFLR1Q9H665 355 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 CPA4Q9UI42 421 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SMG5Q9UPR3 1016 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 P4HA2O15460 535 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ICAM1P05362 532 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 PCNAP12004 261 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 S100A5P33763 92 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 FEZF2Q8TBJ5 459 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 GBA2Q9HCG7 927 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 DSEQ9UL01 958 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ALDH2P05091 517 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 MUTP22033 750 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 KRT20P35900 424 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 LRRC36Q1X8D7 754 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 SEZ6Q53EL9 994 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 AHCYL2Q96HN2 611 aaKnown RBP11.65□□□□□ -0.54
PTCH1-205ENST00000418258 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 TMEM39AQ9NV64 488 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 DPP7Q9UHL4 492 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 CST8O60676 142 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 TGM2P21980 687 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 RAD23BP54727 409 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ORC1Q13415 861 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 ITIH5Q86UX2 942 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 MTMR12Q9C0I1 747 aa11.65□□□□□ -0.54
PTCH1-205ENST00000418258 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 SPATA31E1Q6ZUB1 1445 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 PREPLQ4J6C6 727 aaPredicted RBP11.65□□□□□ -0.55
PTCH1-205ENST00000418258 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.55
PTCH1-205ENST00000418258 OSBPL8Q9BZF1 889 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 MROH8Q9H579 483 aa11.65□□□□□ -0.55
PTCH1-205ENST00000418258 APPL1Q9UKG1 709 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms