RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 FAM71DQ8N9W8 422 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 NIFKQ9BYG3 293 aaKnown RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PCDH9Q9HC56 1237 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 NPHS2Q9NP85 383 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 MAGEB2O15479 319 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 CSDE1O75534 798 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TOM1L1O75674 476 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 STAM2O75886 525 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 FARP2O94887 1054 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 OAZ1P54368 228 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 SLC25A11Q02978 314 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 SETDB1Q15047 1291 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TARBP2Q15633 366 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 RAB6CQ53S08 254 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 DPH6Q7L8W6 267 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 FBXO36Q8NEA4 188 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 FBF1Q8TES7 1133 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TRAPPC12Q8WVT3 735 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 RAB6CQ9H0N0 254 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 AS3MTQ9HBK9 375 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 PSMC3IPQ9P2W1 217 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 DCTN4Q9UJW0 460 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 C15orf41Q9Y2V0 281 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TMEM63AO94886 807 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 LSM8O95777 96 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 T-ENOLP0DO92 83 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 ABCD1P33897 745 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 CLNS1AP54105 237 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 GEMIN4P57678 1058 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 NR1H3Q13133 447 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 SGSM1Q2NKQ1 1148 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 BBS9Q3SYG4 887 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 ANGEL2Q5VTE6 544 aaKnown RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 IGDCC3Q8IVU1 814 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 HSPH1Q92598 858 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 ZNF75CPQ92670 426 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 XYLT2Q9H1B5 865 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 UBN1Q9NPG3 1134 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 SLC17A7Q9P2U7 560 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 NKX1-2Q9UD57 310 aaPredicted RBP15.21■□□□□ 0.03
HDAC9-208ENST00000417496 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 KCNG1Q9UIX4 513 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 SHOC2Q9UQ13 582 aa15.21■□□□□ 0.03
HDAC9-208ENST00000417496 EIF4BP23588 611 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 YARSP54577 528 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 SH3PXD2AQ5TCZ1 1133 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 LRRN4Q8WUT4 740 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 RSAD2Q8WXG1 361 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 PAFAH2Q99487 392 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 ACO2Q99798 780 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 SMG5Q9UPR3 1016 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 USH1CQ9Y6N9 552 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 KDELR1P24390 212 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 BASP1P80723 227 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 LAMTOR4Q0VGL1 99 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 NPNTQ6UXI9 565 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 NAT8LQ8N9F0 302 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 TCP10LQ8TDR4 215 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 CALN1Q9BXU9 219 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 MRPL4Q9BYD3 311 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 NRBP2Q9NSY0 501 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 DDX56Q9NY93 547 aaKnown RBP15.2■□□□□ 0.02
HDAC9-208ENST00000417496 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
HDAC9-208ENST00000417496 EIF4E1BA6NMX2 242 aaKnown RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 AVILO75366 819 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ERBB2P04626 1255 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 HOXC6P09630 235 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 CCND1P24385 295 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 NAA25Q14CX7 972 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 TAF1BQ53T94 588 aaPredicted RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ZC3H18Q86VM9 953 aaKnown RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PPIL6Q8IXY8 311 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 KCTD6Q8NC69 237 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 C10orf82Q8WW14 230 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PTPRN2Q92932 1015 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 NLRP4Q96MN2 994 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ZNF570Q96NI8 536 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 TWNKQ96RR1 684 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 SYNCQ9H7C4 482 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PIM2Q9P1W9 311 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 XPO7Q9UIA9 1087 aaKnown RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 CPSF3Q9UKF6 684 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms