RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TRDMT1O14717 391 aaKnown RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 GABRDO14764 452 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 HCRTO43612 131 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 NOL4O94818 638 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 KRT19P08727 400 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 ARSAP15289 507 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 GRSF1Q12849 480 aaKnown RBP eCLIP15.91■□□□□ 0.14
RPS28-201ENST00000417088 ZNF268Q14587 947 aaPredicted RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 SOWAHAQ2M3V2 549 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 CEP68Q76N32 757 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 FAM160A2Q8N612 972 aaPredicted RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 TOP6BLQ8N6T0 577 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 SPATA18Q8TC71 538 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 NOC3LQ8WTT2 800 aaKnown RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 TRMT2BQ96GJ1 504 aaKnown RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 MYRFLQ96LU7 910 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 MTMR12Q9C0I1 747 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 TMEM206Q9H813 350 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 UXTQ9UBK9 157 aaPredicted RBP15.91■□□□□ 0.14
RPS28-201ENST00000417088 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
RPS28-201ENST00000417088 TMEM191BP0C7N4 346 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 LHX1P48742 406 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 CSRP2Q16527 193 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 CFAP221Q4G0U5 840 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 LMBRD2Q68DH5 695 aaPredicted RBP15.9■□□□□ 0.14
RPS28-201ENST00000417088 CC2D1AQ6P1N0 951 aaPredicted RBP15.9■□□□□ 0.14
RPS28-201ENST00000417088 PRR23CQ6ZRP0 262 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 LIMS2Q7Z4I7 341 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 ADGRF2Q8IZF7 708 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 GPD1LQ8N335 351 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 PDILTQ8N807 584 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 GLIS3Q8NEA6 775 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 CYP2S1Q96SQ9 504 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 PTPRJQ12913 1337 aa15.9■□□□□ 0.14
RPS28-201ENST00000417088 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.89■□□□□ 0.13
RPS28-201ENST00000417088 SLC30A4O14863 429 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 ATP2C2O75185 946 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 EGFP01133 1207 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 PCSK1P29120 753 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 PXNP49023 591 aaPredicted RBP15.89■□□□□ 0.13
RPS28-201ENST00000417088 GALK1P51570 392 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 PDGFRLQ15198 375 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 NAIF1Q69YI7 327 aaPredicted RBP15.89■□□□□ 0.13
RPS28-201ENST00000417088 FAM171BQ6P995 826 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 DPH6Q7L8W6 267 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 SPATA2LQ8IUW3 424 aaPredicted RBP15.89■□□□□ 0.13
RPS28-201ENST00000417088 SCN4BQ8IWT1 228 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 CCDC65Q8IXS2 484 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 FUBP3Q96I24 572 aaKnown RBP eCLIP15.89■□□□□ 0.13
RPS28-201ENST00000417088 ANKRD36BP1Q96IX9 119 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 SLC22A12Q96S37 553 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 INTS13Q9NVM9 706 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 EPG5Q9HCE0 2579 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 ZNF638Q14966 1978 aaKnown RBP15.89■□□□□ 0.13
RPS28-201ENST00000417088 ACACBO00763 2458 aa15.89■□□□□ 0.13
RPS28-201ENST00000417088 OBSL1O75147 1896 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 CCDC163A0A0D9SF12 145 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 ZNF233A6NK53 670 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 KIAA0391O15091 583 aaKnown RBP15.88■□□□□ 0.13
RPS28-201ENST00000417088 GDF9O60383 454 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 ATG13O75143 517 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 RNF40O75150 1001 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 MAGEA11P43364 429 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 NASPP49321 788 aaPredicted RBP15.88■□□□□ 0.13
RPS28-201ENST00000417088 AMPD2Q01433 879 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 MTF1Q14872 753 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 ZNF77Q15935 545 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 CBWD2Q8IUF1 395 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 KBTBD7Q8WVZ9 684 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 HPS3Q969F9 1004 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
RPS28-201ENST00000417088 HPDLQ96IR7 371 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 ECT2Q9H8V3 914 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 TRPC7Q9HCX4 862 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
RPS28-201ENST00000417088 GCNT4Q9P109 453 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 SLC8A2Q9UPR5 921 aa15.88■□□□□ 0.13
RPS28-201ENST00000417088 TRAV19A0A0A6YYK7 116 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 TNNC2P02585 160 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 USP17L7P0C7H9 530 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 DRD1P21728 446 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 LMO2P25791 158 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 GJA4P35212 333 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 HOXD13P35453 343 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 USP4Q13107 963 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 DUOXA2Q1HG44 320 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 ARL14EPQ8N8R7 260 aaPredicted RBP15.87■□□□□ 0.13
RPS28-201ENST00000417088 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 OSCP1Q8WVF1 389 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 GAB3Q8WWW8 586 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 P2RY13Q9BPV8 354 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 SYT15Q9BQS2 421 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms