RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CLDN10P78369 228 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 ZNF528Q3MIS6 628 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 ARHGAP29Q52LW3 1261 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 SPATA2LQ8IUW3 424 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-210ENST00000416778 CMTM8Q8IZV2 173 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 STKLD1Q8NE28 680 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 GOLGA5Q8TBA6 731 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 FUBP3Q96I24 572 aaKnown RBP eCLIP19.14■□□□□ 0.65
CPNE1-210ENST00000416778 MMS19Q96T76 1030 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 MRPL45Q9BRJ2 306 aaKnown RBP19.14■□□□□ 0.65
CPNE1-210ENST00000416778 SMG9Q9H0W8 520 aaKnown RBP19.14■□□□□ 0.65
CPNE1-210ENST00000416778 KCTD10Q9H3F6 313 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 LMAN1LQ9HAT1 526 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 ZMYM5Q9UJ78 669 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 FBXO4Q9UKT5 387 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 NDRG2Q9UN36 371 aaKnown RBP19.14■□□□□ 0.65
CPNE1-210ENST00000416778 NME7Q9Y5B8 376 aa19.14■□□□□ 0.65
CPNE1-210ENST00000416778 SLC38A8A6NNN8 435 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 LAMTOR5O43504 91 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 TACC1O75410 805 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 CCNE1P24864 410 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MAGEA11P43364 429 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 SYKP43405 635 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 CASP4P49662 377 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MYL6P60660 151 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 WDR72Q3MJ13 1102 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MON1AQ86VX9 555 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 SLC9A9Q8IVB4 645 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 CELF5Q8N6W0 485 aaKnown RBP19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MAB21L3Q8N8X9 362 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 BPIFB1Q8TDL5 484 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 CSGALNACT1Q8TDX6 532 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 PARD3BQ8TEW8 1205 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 TRMT2BQ96GJ1 504 aaKnown RBP19.13■□□□□ 0.65
CPNE1-210ENST00000416778 ZFYVE19Q96K21 471 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 GCNAQ96QF7 691 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 SYT15Q9BQS2 421 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 XYLT2Q9H1B5 865 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 C8orf33Q9H7E9 229 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-210ENST00000416778 EXOC1Q9NV70 894 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MAGEC2Q9UBF1 373 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-210ENST00000416778 MAGED2Q9UNF1 606 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-210ENST00000416778 FAM186AA6NE01 2351 aa19.13■□□□□ 0.65
CPNE1-210ENST00000416778 PDXKO00764 312 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
CPNE1-210ENST00000416778 C4BPAP04003 597 aaKnown RBP19.12■□□□□ 0.65
CPNE1-210ENST00000416778 CHRNB1P11230 501 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 DDX6P26196 483 aaKnown RBP eCLIP19.12■□□□□ 0.659e-13■■■■□ 25.3
CPNE1-210ENST00000416778 CSTF1Q05048 431 aaKnown RBP19.12■□□□□ 0.65
CPNE1-210ENST00000416778 MTAPQ13126 283 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 MYCBPAPQ8TBZ2 947 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 NELL1Q92832 810 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 USP13Q92995 863 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-210ENST00000416778 SCAND2PQ9GZW5 306 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-210ENST00000416778 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 GTSE1Q9NYZ3 720 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 TCHHQ07283 1943 aa19.12■□□□□ 0.65
CPNE1-210ENST00000416778 EP300Q09472 2414 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 RPN1P04843 607 aaKnown RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 ATICP31939 592 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 SOX9P48436 509 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 KPNA1P52294 538 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 PSMC1P62191 440 aaKnown RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 TRPC3Q13507 836 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 C4orf50Q6ZRC1 276 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 SCN4BQ8IWT1 228 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 ADSSL1Q8N142 457 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 TTC8Q8TAM2 541 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 SPATA17Q96L03 361 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 FAM83CQ9BQN1 747 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 CHRDQ9H2X0 955 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 SNX25Q9H3E2 840 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 TDP1Q9NUW8 608 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 THG1LQ9NWX6 298 aaKnown RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 UXTQ9UBK9 157 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-210ENST00000416778 CCL26Q9Y258 94 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 ATP6V1DQ9Y5K8 247 aa19.11■□□□□ 0.65
CPNE1-210ENST00000416778 ZNF292O60281 2723 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 LRRIQ3A6PVS8 624 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-210ENST00000416778 LMNAP02545 664 aaKnown RBP19.1■□□□□ 0.65
CPNE1-210ENST00000416778 PTPN1P18031 435 aaKnown RBP19.1■□□□□ 0.65
CPNE1-210ENST00000416778 BDNFP23560 247 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 AVPR1AP37288 418 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 AP3M2P53677 418 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 PLCB2Q00722 1185 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 TNK2Q07912 1038 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 DPYDQ12882 1025 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 WDR44Q5JSH3 913 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 C1orf228Q6PIY5 440 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 VSTM1Q6UX27 236 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 RALGPS2Q86X27 583 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-210ENST00000416778 OR6B3Q8NGW1 331 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 MRPS31Q92665 395 aaKnown RBP19.1■□□□□ 0.65
CPNE1-210ENST00000416778 MYLPFQ96A32 169 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 MSANTD3Q96H12 275 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms