RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MTAPQ13126 283 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 GAS6Q14393 721 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
UBXN4-203ENST00000416538 DUOXA2Q1HG44 320 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 FAM171BQ6P995 826 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 TSSK4Q6SA08 328 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 TTC8Q8TAM2 541 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 MYLPFQ96A32 169 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 SYT15Q9BQS2 421 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 XYLT2Q9H1B5 865 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 CHRDQ9H2X0 955 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 KIAA1586Q9HCI6 787 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 ABCB6Q9NP58 842 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 TMEM30AQ9NV96 361 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 CEP250Q9BV73 2442 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 MYOFQ9NZM1 2061 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 FGF19O95750 216 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 TDGF1P13385 188 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 WARSP23381 471 aaKnown RBP16.18■□□□□ 0.18
UBXN4-203ENST00000416538 CCNE1P24864 410 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 WEE1P30291 646 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 CTHP32929 405 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 SURF1Q15526 300 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
UBXN4-203ENST00000416538 CFAP221Q4G0U5 840 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 ARHGAP15Q53QZ3 475 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 TXNDC8Q6A555 127 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 CEP57L1Q8IYX8 460 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 FAM3CQ92520 227 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
UBXN4-203ENST00000416538 E2F7Q96AV8 911 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 SLC22A12Q96S37 553 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 GOLPH3LQ9H4A5 285 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 OBP2AQ9NY56 170 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 MAGED2Q9UNF1 606 aaPredicted RBP16.18■□□□□ 0.18
UBXN4-203ENST00000416538 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
UBXN4-203ENST00000416538 FAM237AA0A1B0GTK4 181 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 LRRIQ3A6PVS8 624 aaPredicted RBP16.17■□□□□ 0.18
UBXN4-203ENST00000416538 LAMTOR5O43504 91 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 CHRNB1P11230 501 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 TNNI1P19237 187 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 CMA1P23946 247 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 PCSK1P29120 753 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 HOXC13P31276 330 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 LHX1P48742 406 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 NDUFA8P51970 172 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 MYL6P60660 151 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 MYO1EQ12965 1108 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 TDRD10Q5VZ19 366 aaKnown RBP16.17■□□□□ 0.18
UBXN4-203ENST00000416538 Q6ZS52 159 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 CMTM8Q8IZV2 173 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 ADSSL1Q8N142 457 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 MAB21L3Q8N8X9 362 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 BPIFB1Q8TDL5 484 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 NELL1Q92832 810 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 GCNAQ96QF7 691 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 DPEP3Q9H4B8 488 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 RBM12Q9NTZ6 932 aaKnown RBP16.17■□□□□ 0.18
UBXN4-203ENST00000416538 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 C2orf42Q9NWW7 574 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 SPAG17Q6Q759 2223 aa16.17■□□□□ 0.18
UBXN4-203ENST00000416538 WDR87Q6ZQQ6 2873 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 OTOL1A6NHN0 477 aaPredicted RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 MAN2B1O00754 1011 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 PDGFRBP09619 1106 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CSH1P0DML2 217 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CSH2P0DML3 217 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 MAGEA9P43362 315 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CLCN6P51797 869 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 USP46P62068 366 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 SNRPFP62306 86 aaKnown RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 KRT85P78386 507 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CSTF1Q05048 431 aaKnown RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 TRIM68Q6AZZ1 485 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 SPATA2LQ8IUW3 424 aaPredicted RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 YAF2Q8IY57 180 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 SUMF1Q8NBK3 374 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 TRMT2BQ96GJ1 504 aaKnown RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 PCED1BQ96HM7 432 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 FUBP3Q96I24 572 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 MYRFLQ96LU7 910 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 NELL2Q99435 816 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 EXOC1Q9NV70 894 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 FBXO4Q9UKT5 387 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
UBXN4-203ENST00000416538 MRPS17Q9Y2R5 130 aaKnown RBP16.16■□□□□ 0.18
UBXN4-203ENST00000416538 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms