RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 GDF3Q9NR23 364 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 R3HDM2Q9Y2K5 976 aaKnown RBP12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 COL2A1P02458 1487 aaPredicted RBP12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 GPD1P21695 349 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 ARHGAP1Q07960 439 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 FAM117BQ6P1L5 589 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 ZFP42Q96MM3 310 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 GPR88Q9GZN0 384 aa12.27□□□□□ -0.45
FNDC3B-202ENST00000415807 CYP1A2P05177 515 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 PHBP35232 272 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 ADCY2Q08462 1091 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TFDP2Q14188 446 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 FBXO47Q5MNV8 452 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 C4orf33Q8N1A6 199 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CFAP57Q96MR6 1250 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 B3GNT5Q9BYG0 378 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 HAPLN2Q9GZV7 340 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TUBGCP4Q9UGJ1 667 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CAPN7Q9Y6W3 813 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 NCANO14594 1321 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TRPA1O75762 1119 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 UPP2O95045 317 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 MMP3P08254 477 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 MSH2P43246 934 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TAF6P49848 677 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 FAM172AQ8WUF8 416 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 SMC6Q96SB8 1091 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CEP41Q9BYV8 373 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 HMGXB4Q9UGU5 601 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CPSF3Q9UKF6 684 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 UBQLN1Q9UMX0 589 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 VDRP11473 427 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 ROR1Q01973 937 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 PPTC7Q8NI37 304 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 NPLOC4Q8TAT6 608 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 BARX2Q9UMQ3 279 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 USP18Q9UMW8 372 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 ADAMTS5Q9UNA0 930 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CYB561D2O14569 222 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 CPP00450 1065 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 MBTD1Q05BQ5 628 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 MAP2K5Q13163 448 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 SCARA3Q6AZY7 606 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 PIH1D1Q9NWS0 290 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-202ENST00000415807 SHBGP04278 402 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 EDN1P05305 212 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 ELNP15502 786 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 SULT1E1P49888 294 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 PTPN20Q4JDL3 420 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 CPXM1Q96SM3 734 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 CDC42EP4Q9H3Q1 356 aaKnown RBP12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 C22orf31O95567 290 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 RABGGTBP53611 331 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 TFDP3Q5H9I0 405 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 DCAF12L1Q5VU92 463 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 CROCCP2Q86T23 111 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 PPM1NQ8N819 430 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 ASB7Q9H672 318 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 WDR35Q9P2L0 1181 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 COQ4Q9Y3A0 265 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 TCF4P15884 667 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 MNAT1P51948 309 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 HIF1AQ16665 826 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 NDRG1Q92597 394 aaKnown RBP12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 KCNH4Q9UQ05 1017 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 ITIH2P19823 946 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 MIPP30301 263 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 ARL4CP56559 192 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 MAP3K7CLP57077 242 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 MCL1Q07820 350 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 MMRN1Q13201 1228 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 FAM110CQ1W6H9 321 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 SLC10A6Q3KNW5 377 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 TTMPQ5BVD1 217 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 SLC7A14Q8TBB6 771 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 FBXL18Q96ME1 805 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 PDZD7Q9H5P4 517 aa12.25□□□□□ -0.45
FNDC3B-202ENST00000415807 BTNL10A8MVZ5 291 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms