RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 CHUKO15111 745 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 DNAJB2P25686 324 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 FUT2Q10981 343 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 ACBD5Q5T8D3 534 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 PCDHB12Q9Y5F1 795 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 MROH7Q68CQ1 1323 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SPECC1L-ADORA2AF8WAN1 911 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SGPL1O95470 568 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 APOA4P06727 396 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 CREMQ03060 361 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 GTF2H3Q13889 308 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 HAS1Q92839 578 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 ADAM21Q9UKJ8 722 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 ANGPTL2Q9UKU9 493 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SLC30A1Q9Y6M5 507 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 EIF3HO15372 352 aaKnown RBP eCLIP12.49□□□□□ -0.414e-7■□□□□ 10.7
PTPRF-205ENST00000414879 MYO1DO94832 1006 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 APRTP07741 180 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 PRKCIP41743 596 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 SERPINB4P48594 390 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 OCRLQ01968 901 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 YWHAHQ04917 246 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 RCN2Q14257 317 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 UNC45BQ8IWX7 931 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 LZTR1Q8N653 840 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 DNAJC17Q9NVM6 304 aaKnown RBP12.49□□□□□ -0.41
PTPRF-205ENST00000414879 WHRNQ9P202 907 aa12.49□□□□□ -0.41
PTPRF-205ENST00000414879 LRP6O75581 1613 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PI4K2BG5E9Z4 385 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 EML1O00423 815 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 MYL6P60660 151 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CTXN3Q4LDR2 81 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CYP2W1Q8TAV3 490 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ETNPPLQ8TBG4 499 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 UCMAQ8WVF2 138 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 OSMRQ99650 979 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 HSD17B14Q9BPX1 270 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 SLFN11Q7Z7L1 901 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 WWP1Q9H0M0 922 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 TRIM45Q9H8W5 580 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 DDIT4Q9NX09 232 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 NVLO15381 856 aaKnown RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PJA2O43164 708 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PYGBP11216 843 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 EPHB3P54753 998 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PRMT2P55345 433 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 MAPK7Q13164 816 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CCNG2Q16589 344 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 WDR93Q6P2C0 686 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 DERAQ9Y315 318 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 PCDHB5Q9Y5E4 795 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 F5H5T6 163 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 M0QYT0 321 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CLGNO14967 610 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 GSTA4O15217 222 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 TGM2P21980 687 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 CYP2C18P33260 490 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 RGS4P49798 205 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 KLK7P49862 253 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 MAML1Q92585 1016 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
PTPRF-205ENST00000414879 UXTQ9UBK9 157 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-205ENST00000414879 UPP2O95045 317 aa12.47□□□□□ -0.41
PTPRF-205ENST00000414879 ERBB2P04626 1255 aa12.47□□□□□ -0.41
PTPRF-205ENST00000414879 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
PTPRF-205ENST00000414879 AMPD2Q01433 879 aa12.47□□□□□ -0.41
PTPRF-205ENST00000414879 AARS2Q5JTZ9 985 aaKnown RBP12.47□□□□□ -0.41
PTPRF-205ENST00000414879 ACOT1Q86TX2 421 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms