RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 PADI6Q6TGC4 694 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 PDCD7Q8N8D1 485 aaKnown RBP17.1■□□□□ 0.33
CPNE1-208ENST00000414711 OR10T2Q8NGX3 314 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
CPNE1-208ENST00000414711 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 K7ERI5 159 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 DKK1O94907 266 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 CHRM1P11229 460 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 LRPAP1P30533 357 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 TIE1P35590 1138 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 GRIK2Q13002 908 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 HSPA12BQ96MM6 686 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 KIF2CQ99661 725 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 IGSF5Q9NSI5 407 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 TSC2P49815 1807 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 HELZP42694 1942 aaKnown RBP17.09■□□□□ 0.33
CPNE1-208ENST00000414711 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
CPNE1-208ENST00000414711 NFATC1O95644 943 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 ATXN1LP0C7T5 689 aaKnown RBP17.08■□□□□ 0.32
CPNE1-208ENST00000414711 SPATA31C1P0DKV0 1188 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 HMGA1P17096 107 aaKnown RBP17.08■□□□□ 0.32
CPNE1-208ENST00000414711 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
CPNE1-208ENST00000414711 CALCRLQ16602 461 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 SFTPA1Q8IWL2 248 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 BAHD1Q8TBE0 780 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-208ENST00000414711 TCHPQ9BT92 498 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 SUSD2Q9UGT4 822 aa17.08■□□□□ 0.32
CPNE1-208ENST00000414711 COL6A6A6NMZ7 2263 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 TEX51A0A1B0GUA7 166 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ARHGEF35A5YM69 484 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 PYCARD-AS1I3L0S3 204 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ABLIM1O14639 778 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ADAM23O75077 832 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 CKMP06732 381 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ODC1P11926 461 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 PROZP22891 400 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 KCNC4Q03721 635 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 MPZL3Q6UWV2 235 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 LRRC69Q6ZNQ3 347 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ZDHHC5Q9C0B5 715 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 FAM124BQ9H5Z6 455 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-208ENST00000414711 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
CPNE1-208ENST00000414711 MAGED2Q9UNF1 606 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-208ENST00000414711 TADA3O75528 432 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 USP17L7P0C7H9 530 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-208ENST00000414711 HLA-EP13747 358 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 EIF2S3P41091 472 aaKnown RBP17.06■□□□□ 0.32
CPNE1-208ENST00000414711 SPAG1Q07617 926 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 EARS2Q5JPH6 523 aaKnown RBP17.06■□□□□ 0.32
CPNE1-208ENST00000414711 PCSK4Q6UW60 755 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 GPR155Q7Z3F1 870 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 RGL4Q8IZJ4 473 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 FBXL16Q8N461 479 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 STKLD1Q8NE28 680 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
CPNE1-208ENST00000414711 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
CPNE1-208ENST00000414711 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 PRDM16Q9HAZ2 1276 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 ZDHHC4Q9NPG8 344 aa17.06■□□□□ 0.32
CPNE1-208ENST00000414711 STK36Q9NRP7 1315 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 TRAV19A0A0A6YYK7 116 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 IGHV1OR15-9A0A0B4J2B8 117 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 FAM205CA6NFA0 338 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 E9PAM4 449 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 MED24O75448 989 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 GNSP15586 552 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 TXKP42681 527 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 KIR2DL1P43626 348 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-208ENST00000414711 SCRN1Q12765 414 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 SEZ6Q53EL9 994 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 BLOC1S2Q6QNY1 142 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 SPATA18Q8TC71 538 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 SPPL2BQ8TCT7 592 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 KIFAP3Q92845 792 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 NXPE2Q96DL1 559 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms