RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 SLC8B1Q6J4K2 584 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 RSPO2Q6UXX9 243 aaPredicted RBP16.33■□□□□ 0.2
LINC00116-201ENST00000414416 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
LINC00116-201ENST00000414416 EPS8L1Q8TE68 723 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 GDPD5Q8WTR4 605 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 ZNF576Q9H609 170 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 NGRNQ9NPE2 291 aaKnown RBP16.33■□□□□ 0.2
LINC00116-201ENST00000414416 FAM49BQ9NUQ9 324 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 TFR2Q9UP52 801 aa16.33■□□□□ 0.2
LINC00116-201ENST00000414416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 MYBPHLA2RUH7 354 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CCP110O43303 1012 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 LILRB3O75022 631 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 SERPING1P05155 500 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 OR4Q2P0C623 313 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CPB1P15086 417 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 BRD2P25440 801 aaKnown RBP16.32■□□□□ 0.2
LINC00116-201ENST00000414416 PRKCIP41743 596 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 ARPP19P56211 112 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CDK17Q00537 523 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CAMK1Q14012 370 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 MAPRE1Q15691 268 aaKnown RBP16.32■□□□□ 0.2
LINC00116-201ENST00000414416 SLC39A12Q504Y0 691 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
LINC00116-201ENST00000414416 PLPP4Q5VZY2 271 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 FAM171BQ6P995 826 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 MYCBPAPQ8TBZ2 947 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 ZNF606Q8WXB4 792 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 TFAP2BQ92481 460 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 PKMYT1Q99640 499 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CLSTN3Q9BQT9 956 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 LZTFL1Q9NQ48 299 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 IRAK3Q9Y616 596 aa16.32■□□□□ 0.2
LINC00116-201ENST00000414416 BZW2Q9Y6E2 419 aaKnown RBP16.32■□□□□ 0.2
LINC00116-201ENST00000414416 CDH23Q9H251 3354 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 EPOPA6NHQ4 379 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 FANCGO15287 622 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 MED7O43513 233 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 OR1D2P34982 312 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 NOP9Q86U38 636 aaKnown RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 GLYCTKQ8IVS8 523 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 IRX2Q9BZI1 471 aaPredicted RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 NOCTQ9UK39 431 aaKnown RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 FSCN2O14926 492 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 ZNF263O14978 683 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 ADAM12O43184 909 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 LPXNO60711 386 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 CCDC130P13994 396 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 CDR1P51861 262 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 PPP1R26Q5T8A7 1209 aaPredicted RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 SYT10Q6XYQ8 523 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 ZNF677Q86XU0 584 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 MRPL43Q8N983 215 aaKnown RBP16.31■□□□□ 0.2
LINC00116-201ENST00000414416 PCED1BQ96HM7 432 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 LMAN2LQ9H0V9 348 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 RXFP1Q9HBX9 757 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 TMLHEQ9NVH6 421 aa16.31■□□□□ 0.2
LINC00116-201ENST00000414416 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 TEX28O15482 410 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
LINC00116-201ENST00000414416 IRS1P35568 1242 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 NDUFV1P49821 464 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 ROR1Q01973 937 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 GPR17Q13304 367 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 STILQ15468 1287 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
LINC00116-201ENST00000414416 ARHGAP17Q68EM7 881 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 SLC2A14Q8TDB8 520 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 SLC20A1Q8WUM9 679 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 DDX1Q92499 740 aaKnown RBP16.3■□□□□ 0.2
LINC00116-201ENST00000414416 MYLPFQ96A32 169 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 EMILIN2Q9BXX0 1053 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 PCDHGC5Q9Y5F6 944 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 HIDE1A8MVS5 230 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 O00370 1275 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 ARHGAP25P42331 645 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 CDR2Q01850 454 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 CNGA2Q16280 664 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 C4orf50Q6ZRC1 276 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
LINC00116-201ENST00000414416 CCDC170Q8IYT3 715 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 CCDC42Q96M95 316 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
LINC00116-201ENST00000414416 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
LINC00116-201ENST00000414416 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms