RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 PNPLA4P41247 253 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 SLC44A4Q53GD3 710 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 GPD1LQ8N335 351 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 CACTINQ8WUQ7 758 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 ZNF560Q96MR9 790 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 PGLYRP2Q96PD5 576 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 EDEM3Q9BZQ6 932 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 ZFP14Q9HCL3 533 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 CEP72Q9P209 647 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 YIPF1Q9Y548 306 aa18.1■□□□□ 0.49
SCAMP4-204ENST00000414057 PROB1E7EW31 1015 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 PPEF2O14830 753 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 OR4Q2P0C623 313 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 MYL4P12829 197 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 TRIM21P19474 475 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 NBL1P41271 181 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 EPHA5P54756 1037 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 SMARCB1Q12824 385 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 DUSP4Q13115 394 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 ANGPT1Q15389 498 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 MLF2Q15773 248 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 SV2CQ496J9 727 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 DCAF17Q5H9S7 520 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 TCERG1LQ5VWI1 586 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 CRELD2Q6UXH1 353 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 TMEM130Q8N3G9 435 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 PANX2Q96RD6 677 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 FAM213AQ9BRX8 229 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 KCNF1Q9H3M0 494 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 PCIF1Q9H4Z3 704 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 SIK3Q9Y2K2 1263 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 ASB3Q9Y575 518 aa18.09■□□□□ 0.49
SCAMP4-204ENST00000414057 KANSL1LA0AUZ9 987 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 TULP1O00294 542 aaPredicted RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 CYB561D2O14569 222 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 SPTLC1O15269 473 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 P4HA2O15460 535 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 EXTL3O43909 919 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 GFRA3O60609 400 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 MFAP3LO75121 409 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 FGF19O95750 216 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 GYPCP04921 128 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 MSNP26038 577 aaKnown RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 ITIH5Q86UX2 942 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 BRSK2Q8IWQ3 736 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 TC2NQ8N9U0 490 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 TMC2Q8TDI7 906 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 PCMTD1Q96MG8 357 aaPredicted RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 NAA15Q9BXJ9 866 aaKnown RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 RBAKQ9NYW8 714 aaPredicted RBP18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 CAPN11Q9UMQ6 739 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 DAAM1Q9Y4D1 1078 aa18.08■□□□□ 0.49
SCAMP4-204ENST00000414057 MTMR11A4FU01 709 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 KPNA7A9QM74 516 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 PMM2O15305 246 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 CASP14P31944 242 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 VAMP7P51809 220 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 PJA1Q8NG27 643 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 C2orf15Q8WU43 125 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 DNASE1L2Q92874 299 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 SMARCD2Q92925 531 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 E2F7Q96AV8 911 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 TCEAL4Q96EI5 215 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 ASB16Q96NS5 453 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 NELL2Q99435 816 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 OSBPL6Q9BZF3 934 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 TTYH3Q9C0H2 523 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 LUC7L2Q9Y383 392 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 ZNF233A6NK53 670 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 ESPNB1AK53 854 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 NCAM2O15394 837 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 CCR2P41597 374 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 MAGEA9P43362 315 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 TFAMQ00059 246 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 CETN1Q12798 172 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 VEPH1Q14D04 833 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 FAM78AQ5JUQ0 283 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 TANGO2Q6ICL3 276 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 EFCAB13Q8IY85 973 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 HS6ST3Q8IZP7 471 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 NEK11Q8NG66 645 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 SAAL1Q96ER3 474 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 DDX23Q9BUQ8 820 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 TRMT61BQ9BVS5 477 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 BCO2Q9BYV7 579 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 SLITRK6Q9H5Y7 841 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 PLCB1Q9NQ66 1216 aa18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 MRPS17Q9Y2R5 130 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-204ENST00000414057 DCNP07585 359 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-204ENST00000414057 SKILP12757 684 aa18.06■□□□□ 0.48
SCAMP4-204ENST00000414057 GTF2H1P32780 548 aa18.06■□□□□ 0.48
SCAMP4-204ENST00000414057 FMO5P49326 533 aa18.06■□□□□ 0.48
SCAMP4-204ENST00000414057 ZBED6P86452 979 aa18.06■□□□□ 0.48
SCAMP4-204ENST00000414057 SURF1Q15526 300 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms