RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SHISA7A6NL88 538 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 SLC38A8A6NNN8 435 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 CLSTN1O94985 981 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 PRAMEF12O95522 483 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 BDNFP23560 247 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 CDC25CP30307 473 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 NLRP12P59046 1061 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 CYP27A1Q02318 531 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 NFIL3Q16649 462 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 ZNF699Q32M78 642 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 ZACNQ401N2 412 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 MDH1BQ5I0G3 518 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 SV2AQ7L0J3 742 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 MFSD6LQ8IWD5 586 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 EEF2KMTQ96G04 330 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 PCED1BQ96HM7 432 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 SHDQ96IW2 340 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 DDX23Q9BUQ8 820 aaKnown RBP28.12■■■□□ 2.09
VEGFA-207ENST00000413642 SDCBP2Q9H190 292 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 MAGEC2Q9UBF1 373 aaPredicted RBP28.12■■■□□ 2.09
VEGFA-207ENST00000413642 PCDHA5Q9Y5H7 936 aa28.12■■■□□ 2.09
VEGFA-207ENST00000413642 GADD45BO75293 160 aaPredicted RBP28.11■■■□□ 2.09
VEGFA-207ENST00000413642 TRIM49P0CI25 452 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 TRIM49CP0CI26 452 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 CSH1P0DML2 217 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 CSH2P0DML3 217 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 GLULP15104 373 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 VAMP7P51809 220 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 PRKCQQ04759 706 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 ADAM9Q13443 819 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 SCARA5Q6ZMJ2 495 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 TPRG1Q6ZUI0 275 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 ALYREFQ86V81 257 aaKnown RBP28.11■■■□□ 2.09
VEGFA-207ENST00000413642 CCDC34Q96HJ3 373 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 FUBP3Q96I24 572 aaKnown RBP eCLIP28.11■■■□□ 2.09
VEGFA-207ENST00000413642 GCNAQ96QF7 691 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.11■■■□□ 2.097e-7■■■■□ 19.4
VEGFA-207ENST00000413642 DLGAP2Q9P1A6 1054 aa28.11■■■□□ 2.09
VEGFA-207ENST00000413642 KANSL1LA0AUZ9 987 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 NOL4O94818 638 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 FAM163BP0C2L3 166 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 PTPN1P18031 435 aaKnown RBP28.1■■■□□ 2.09
VEGFA-207ENST00000413642 PRCPP42785 496 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 ZNF667Q5HYK9 610 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 C4orf50Q6ZRC1 276 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 FAM186BQ8IYM0 893 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 PJA1Q8NG27 643 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 MYCBPAPQ8TBZ2 947 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 DEPDC1BQ8WUY9 529 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 ATOH1Q92858 354 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-207ENST00000413642 VRTNQ9H8Y1 702 aa28.1■■■□□ 2.09
VEGFA-207ENST00000413642 A8MXQ7 604 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 ZNF263O14978 683 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 HOXD11P31277 338 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-207ENST00000413642 MAGEA11P43364 429 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 PPP3CAQ08209 521 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 UBXN2BQ14CS0 331 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 TXNDC8Q6A555 127 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 SPOPLQ6IQ16 392 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 MAB21L3Q8N8X9 362 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 DNASE1L2Q92874 299 aa28.09■■■□□ 2.09
VEGFA-207ENST00000413642 IKBKBO14920 756 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 MAPK13O15264 365 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 TADA3O75528 432 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 RPL13P26373 211 aaKnown RBP28.08■■■□□ 2.09
VEGFA-207ENST00000413642 GCLMP48507 274 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 ZNF658Q5TYW1 1059 aaPredicted RBP28.08■■■□□ 2.09
VEGFA-207ENST00000413642 ISM2Q6H9L7 571 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 IRF7Q92985 503 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 E2F7Q96AV8 911 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 ZFYVE19Q96K21 471 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 TIGD1Q96MW7 591 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 GSDMAQ96QA5 445 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 MMRN2Q9H8L6 949 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 LTB4R2Q9NPC1 389 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 RMND1Q9NWS8 449 aa28.08■■■□□ 2.09
VEGFA-207ENST00000413642 FAM170BA6NMN3 283 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 ARNTLO00327 626 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 CLDN5O00501 218 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 DPYSL4O14531 572 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 HLA-DRAP01903 254 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 PSMC2P35998 433 aaKnown RBP28.07■■■□□ 2.08
VEGFA-207ENST00000413642 GRIK1P39086 918 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 CACNA2D1P54289 1103 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 MAPRE1Q15691 268 aaKnown RBP28.07■■■□□ 2.08
VEGFA-207ENST00000413642 SGSM1Q2NKQ1 1148 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 YAF2Q8IY57 180 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 SPATA20Q8TB22 786 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 SMARCE1Q969G3 411 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 MYRFLQ96LU7 910 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 B3GNT5Q9BYG0 378 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 ZNF518BQ9C0D4 1074 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 TMEM30AQ9NV96 361 aa28.07■■■□□ 2.08
VEGFA-207ENST00000413642 SMC2O95347 1197 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 TARSP26639 723 aaKnown RBP28.06■■■□□ 2.08
VEGFA-207ENST00000413642 PMS1P54277 932 aaKnown RBP28.06■■■□□ 2.08
VEGFA-207ENST00000413642 USP46P62068 366 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 FCHO2Q0JRZ9 810 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 ANGPT1Q15389 498 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 EDRF1Q3B7T1 1238 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms