RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SURF1Q15526 300 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 MAPK6Q16659 721 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 NOP9Q86U38 636 aaKnown RBP18.22■□□□□ 0.51
PTPRC-206ENST00000413409 KRT222Q8N1A0 295 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 ZNF516Q92618 1163 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 ACO2Q99798 780 aaKnown RBP18.22■□□□□ 0.51
PTPRC-206ENST00000413409 ADAM2Q99965 735 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 RGS18Q9NS28 235 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 FBXL21Q9UKT6 434 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 DUSP12Q9UNI6 340 aa18.22■□□□□ 0.51
PTPRC-206ENST00000413409 FANCMQ8IYD8 2048 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 OGTO15294 1046 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 CLDN3O15551 220 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 FAM189A1O60320 539 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 MTA2O94776 668 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 C22orf31O95567 290 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 SP9P0CG40 484 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 CHRNB2P17787 502 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 MATR3P43243 847 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTPRC-206ENST00000413409 CDR2Q01850 454 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 MCL1Q07820 350 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 LONRF2Q1L5Z9 754 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 MAP9Q49MG5 647 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 WDR44Q5JSH3 913 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 ATAT1Q5SQI0 421 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 TDRD10Q5VZ19 366 aaKnown RBP18.21■□□□□ 0.51
PTPRC-206ENST00000413409 KCNT2Q6UVM3 1135 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 ZNF677Q86XU0 584 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 PALB2Q86YC2 1186 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 RNF149Q8NC42 400 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 TRAPPC12Q8WVT3 735 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 ZBTB45Q96K62 511 aaPredicted RBP18.21■□□□□ 0.51
PTPRC-206ENST00000413409 KCNK12Q9HB15 430 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 ABCB6Q9NP58 842 aa18.21■□□□□ 0.51
PTPRC-206ENST00000413409 SEPT11Q9NVA2 429 aaKnown RBP18.21■□□□□ 0.51
PTPRC-206ENST00000413409 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.51
PTPRC-206ENST00000413409 ABLIM1O14639 778 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 MAGEB2O15479 319 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 CYP26A1O43174 497 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 SEC31AO94979 1220 aaKnown RBP18.2■□□□□ 0.5
PTPRC-206ENST00000413409 CYP11B1P15538 503 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 TNNI1P19237 187 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 PROZP22891 400 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 USP8P40818 1118 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 ACOT2P49753 483 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 FMO1Q01740 532 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 GLE1Q53GS7 698 aaKnown RBP18.2■□□□□ 0.5
PTPRC-206ENST00000413409 BEND6Q5SZJ8 279 aaPredicted RBP18.2■□□□□ 0.5
PTPRC-206ENST00000413409 C11orf63Q6NUN7 778 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 PEX26Q7Z412 305 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 IFNLR1Q8IU57 520 aaPredicted RBP18.2■□□□□ 0.5
PTPRC-206ENST00000413409 WDR49Q8IV35 697 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 LRRC71Q8N4P6 559 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 FZD8Q9H461 694 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 PDE11AQ9HCR9 933 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 TAS2R14Q9NYV8 317 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 PTPRJQ12913 1337 aa18.2■□□□□ 0.5
PTPRC-206ENST00000413409 CACNA1IQ9P0X4 2223 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 RRN3P2A6NIE6 340 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 ACKR2O00590 384 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 VNN1O95497 513 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 TBXAS1P24557 533 aaPredicted RBP18.19■□□□□ 0.5
PTPRC-206ENST00000413409 CXCR5P32302 372 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 WNT7BP56706 349 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 BPIFB4P59827 614 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 PTENP60484 403 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 FAM189BP81408 668 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 BIRC3Q13489 604 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 FAM187BQ17R55 369 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 MPZL3Q6UWV2 235 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 SLC24A5Q71RS6 500 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 NT5DC3Q86UY8 548 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 SLC35G2Q8TBE7 412 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 ACTRT1Q8TDG2 376 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 TMEM40Q8WWA1 233 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 TATDN2Q93075 761 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 ARHGEF26Q96DR7 871 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 HES6Q96HZ4 224 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 CASD1Q96PB1 797 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 PSMB7Q99436 277 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 SELENOOQ9BVL4 669 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 DLGAP2Q9P1A6 1054 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
PTPRC-206ENST00000413409 DENND4AQ7Z401 1863 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 TMCO5BA8MYB1 307 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 M0QZ92 97 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 STK25O00506 426 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 BUB1BO60566 1050 aaPredicted RBP18.18■□□□□ 0.5
PTPRC-206ENST00000413409 RPLP2P05387 115 aaKnown RBP18.18■□□□□ 0.5
PTPRC-206ENST00000413409 EPCAMP16422 314 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 TNFRSF8P28908 595 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 PHKA2P46019 1235 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 GPC5P78333 572 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 SMC1AQ14683 1233 aaKnown RBP18.18■□□□□ 0.5
PTPRC-206ENST00000413409 ZBTB41Q5SVQ8 909 aa18.18■□□□□ 0.5
PTPRC-206ENST00000413409 DAAM2Q86T65 1068 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms