RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 PTGIRP43119 386 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ASPAP45381 313 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 MAMLD1Q13495 774 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ZNF268Q14587 947 aaPredicted RBP13.71□□□□□ -0.21
LITAF-203ENST00000413364 PABPC1LQ4VXU2 614 aaKnown RBP13.71□□□□□ -0.21
LITAF-203ENST00000413364 JAMLQ86YT9 394 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 CD302Q8IX05 232 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 DYDC1Q8WWB3 177 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 LRRC45Q96CN5 670 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 TRAPPC9Q96Q05 1148 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 PTPN18Q99952 460 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ARPC5LQ9BPX5 153 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 DPH5Q9H2P9 285 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 EVPLQ92817 2033 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 DPPA5A6NC42 116 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ZNF189O75820 626 aaPredicted RBP13.71□□□□□ -0.21
LITAF-203ENST00000413364 VTNP04004 478 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 MMP3P08254 477 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 STAG3L1P0CL83 205 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 MMP8P22894 467 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.21
LITAF-203ENST00000413364 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
LITAF-203ENST00000413364 SMYD1Q8NB12 490 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 C18orf8Q96DM3 657 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 RUNDC3BQ96NL0 473 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 SIX4Q9UIU6 781 aa13.71□□□□□ -0.21
LITAF-203ENST00000413364 GMNCA6NCL1 334 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 SLC15A5A6NIM6 579 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 LACTBL1A8MY62 500 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 FSCN2O14926 492 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 NFICP08651 508 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 RARAP10276 462 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 DRG2P55039 364 aaKnown RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 KYAT1Q16773 422 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 TTC27Q6P3X3 843 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 SCARA5Q6ZMJ2 495 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 C12orf50Q8NA57 414 aaPredicted RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 OR6J1Q8NGC5 347 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 ARL8AQ96BM9 186 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 PARVAQ9NVD7 372 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
LITAF-203ENST00000413364 A0A1B0GVG6 124 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 NAT1P18440 290 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 GRIK4Q16099 956 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 DGKDQ16760 1214 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 KBTBD12Q3ZCT8 623 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 CCDC92Q53HC0 331 aaPredicted RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 CMPK2Q5EBM0 449 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 MARCH8Q5T0T0 291 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 TMEM35BQ8NCS4 154 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 CCT6BQ92526 530 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 PPP1R14BQ96C90 147 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
LITAF-203ENST00000413364 TRIM31Q9BZY9 425 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 ZNF518BQ9C0D4 1074 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 GALNT8Q9NY28 637 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 ANK1P16157 1881 aa13.7□□□□□ -0.22
LITAF-203ENST00000413364 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 HMGB1P1B2RPK0 211 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 CALB1P05937 261 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 MAN1A1P33908 653 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 HSD17B3P37058 310 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 ABL2P42684 1182 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 LRIG3Q6UXM1 1119 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 NAF1Q96HR8 494 aaKnown RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 BCO2Q9BYV7 579 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 UBE2OQ9C0C9 1292 aaKnown RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 ASB7Q9H672 318 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
LITAF-203ENST00000413364 ITGB1BP2Q9UKP3 347 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 POLIQ9UNA4 740 aa13.69□□□□□ -0.22
LITAF-203ENST00000413364 TMEM98Q9Y2Y6 226 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms