RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 VCPIP1Q96JH7 1222 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 SLC25A18Q9H1K4 315 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 RNF41Q9H4P4 317 aaPredicted RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 PSTPIP2Q9H939 334 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 PARP2Q9UGN5 583 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 CLCA2Q9UQC9 943 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 CCL26Q9Y258 94 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 DXOO77932 396 aaKnown RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ERLIN2O94905 339 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 GABRG2P18507 467 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 GABRR2P28476 465 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 CASRP41180 1078 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ACADVLP49748 655 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 GABREP78334 506 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 CYP4A11Q02928 519 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 KCNA1Q09470 495 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ZSCAN23Q3MJ62 389 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 MTERF2Q49AM1 385 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 EOGTQ5NDL2 527 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 IFIT1BQ5T764 474 aaKnown RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 NOTUMQ6P988 496 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 KDM7AQ6ZMT4 941 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 SRGAP1Q7Z6B7 1085 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ITPRIPQ8IWB1 547 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 SMAP1Q8IYB5 467 aaPredicted RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 FAM9BQ8IZU0 186 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 LSMEM2Q8N112 164 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 RIN3Q8TB24 985 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ZNF564Q8TBZ8 553 aaPredicted RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 CCDC51Q96ER9 411 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 CPB2Q96IY4 423 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 FAM20AQ96MK3 541 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 TASP1Q9H6P5 420 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 ZDHHC4Q9NPG8 344 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 DKK3Q9UBP4 350 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 AFF4Q9UHB7 1163 aaKnown RBP7.71□□□□□ -1.18
UBE2F-204ENST00000409953 SAMM50Q9Y512 469 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 PCDHB1Q9Y5F3 818 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 PCDHA10Q9Y5I2 948 aa7.71□□□□□ -1.18
UBE2F-204ENST00000409953 IGKV6-21A0A0C4DH24 114 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 A0A1B0GVT2 93 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 WIPF3A6NGB9 483 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 MEIS1O00470 390 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 ZNF213O14771 459 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 BCAT2O15382 392 aaPredicted RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 PCDHGA12O60330 932 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 ADAM23O75077 832 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 ZNF217O75362 1048 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 AP1G2O75843 785 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 B3GAT3O94766 335 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 RNF224P0DH78 156 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 JUNDP17535 347 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 BRCC3P46736 316 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 CCT8P50990 548 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 IL9RQ01113 521 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 BFSP1Q12934 665 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 FOXD4L6Q3SYB3 417 aaPredicted RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 HSF5Q4G112 596 aaPredicted RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 FOXD4L3Q6VB84 417 aaPredicted RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 DCBLD1Q8N8Z6 715 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 DNASE2BQ8WZ79 361 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 USP13Q92995 863 aaPredicted RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 CNDP2Q96KP4 475 aaKnown RBP7.7□□□□□ -1.18
UBE2F-204ENST00000409953 SH2D3AQ9BRG2 576 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 THSD1Q9NS62 852 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 FBXL5Q9UKA1 691 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 COL4A3BPQ9Y5P4 624 aa7.7□□□□□ -1.18
UBE2F-204ENST00000409953 HIVEP3Q5T1R4 2406 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 TMEM150BA6NC51 233 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 TMEM189-UBE2V1I3L0A0 370 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 PTGESO14684 152 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 TRAPPC3O43617 180 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 TSPAN1O60635 241 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 FGF19O95750 216 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 THP07101 528 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
UBE2F-204ENST00000409953 EPHB3P54753 998 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 PLD1Q13393 1074 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 NAB2Q15742 525 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 UGCGQ16739 394 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 KIF19Q2TAC6 998 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 SGO2Q562F6 1265 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 FHL5Q5TD97 284 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 USP53Q70EK8 1073 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 MAMDC2Q7Z304 686 aaPredicted RBP7.69□□□□□ -1.18
UBE2F-204ENST00000409953 SFTPA1Q8IWL2 248 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 CMTM8Q8IZV2 173 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 CACTIN-AS1Q8N1I8 211 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 ATP2A3Q93084 1043 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 PGBD1Q96JS3 809 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 ACAP3Q96P50 834 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 MTMR9Q96QG7 549 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms