RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ASIC2Q16515 512 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 EGFL6Q8IUX8 553 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 PRCCQ92733 491 aaPredicted RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CXCL16Q9H2A7 254 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 BATF3Q9NR55 127 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 C1orf112Q9NSG2 853 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 RNF19AQ9NV58 838 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ZMYND8Q9ULU4 1186 aaPredicted RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 PTPRJQ12913 1337 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 C9IYK1 514 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ENPP3O14638 875 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 NFICP08651 508 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ACRP10323 421 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 SKIP12755 728 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ATF7P17544 494 aaPredicted RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 FMO5P49326 533 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 RIPK1Q13546 671 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CBWD6Q4V339 395 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CBWD3Q5JTY5 395 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CBWD5Q5RIA9 395 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CNKSR3Q6P9H4 555 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 TRPM8Q7Z2W7 1104 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 PIGWQ7Z7B1 504 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 BADQ92934 168 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 VWCEQ96DN2 955 aa15.12■□□□□ 0.01
MINDY4-202ENST00000409881 CALR3Q96L12 384 aaKnown RBP15.12■□□□□ 0.01
MINDY4-202ENST00000409881 ZNF623O75123 536 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 VIMP08670 466 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MXI1P50539 228 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MYL7Q01449 175 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 POU5F1Q01860 360 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ITIH4Q14624 930 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 GLRA4Q5JXX5 417 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 JADE1Q6IE81 842 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MRPL10Q7Z7H8 261 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 WDR49Q8IV35 697 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 PGBD4Q96DM1 585 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 NOP53Q9NZM5 478 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 SAMD15Q9P1V8 674 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MLH1P40692 756 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 IFNAR2P48551 515 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 PTK2Q05397 1052 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ENPEPQ07075 957 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 IKBKEQ14164 716 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 LRRC57Q8N9N7 239 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ZNF516Q92618 1163 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 KIF12Q96FN5 646 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 PRMT1Q99873 361 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 MTMR12Q9C0I1 747 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ADAM7Q9H2U9 754 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ASB7Q9H672 318 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 PLEKHA5Q9HAU0 1116 aa15.11■□□□□ 0.01
MINDY4-202ENST00000409881 UTP11Q9Y3A2 253 aaKnown RBP15.11■□□□□ 0.01
MINDY4-202ENST00000409881 ENO4A6NNW6 628 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 A8MUI8 341 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 TMEM132DQ14C87 1099 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CAPRIN2Q6IMN6 1127 aaKnown RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 GAD1Q99259 594 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 FMO2Q99518 471 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CITO14578 2027 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CFAP73A6NFT4 308 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CCDC188H7C350 402 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 UBOX5O94941 541 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 NQO1P15559 274 aaKnown RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CLDN10P78369 228 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 IFI35P80217 286 aaPredicted RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 FPGSQ05932 587 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 KRT39Q6A163 491 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 SV2AQ7L0J3 742 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 ZNF571Q7Z3V5 609 aaPredicted RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 PEX26Q7Z412 305 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 RNF217Q8TC41 542 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CCHCR1Q8TD31 782 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 ZMAT2Q96NC0 199 aaKnown RBP15.1■□□□□ 0.01
MINDY4-202ENST00000409881 RPS6KC1Q96S38 1066 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 TMEM8AQ9HCN3 771 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 IL23AQ9NPF7 189 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 CNTN3Q9P232 1028 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 INPP5FQ9Y2H2 1132 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 NR2E1Q9Y466 385 aa15.1■□□□□ 0.01
MINDY4-202ENST00000409881 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.09■□□□□ 0.01
MINDY4-202ENST00000409881 BRD2P25440 801 aaKnown RBP15.09■□□□□ 0.01
MINDY4-202ENST00000409881 GTF2H1P32780 548 aa15.09■□□□□ 0.01
MINDY4-202ENST00000409881 MCCD1P59942 119 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms